Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 Y_RNA.578-201ENST00000390903 88 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 MTCO2P31-201ENST00000402702 684 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 RN7SKP285-201ENST00000410137 318 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 LIPT1P1-201ENST00000415870 1186 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AL590139.1-201ENST00000416267 400 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AL449283.1-202ENST00000418249 604 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AL691449.1-201ENST00000426570 421 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 MTCYBP32-201ENST00000427945 1084 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC092634.2-201ENST00000428146 1010 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 DNAJC19P7-201ENST00000428811 344 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC114973.1-201ENST00000429057 632 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AL645638.1-201ENST00000440519 361 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 NDUFA5P7-201ENST00000452914 242 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 SBDSP1-204ENST00000453858 737 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC004801.2-202ENST00000463559 283 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 RPL21P104-201ENST00000464143 478 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 UQCRHP4-201ENST00000471686 272 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC012181.1-201ENST00000479895 423 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC093752.1-206ENST00000511823 336 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 RNU6-415P-201ENST00000516252 97 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 RNU6-885P-201ENST00000516607 104 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 snoZ278.1-201ENST00000517059 112 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 OR8I1P-201ENST00000529291 931 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AL139174.1-201ENST00000531489 886 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AL121766.1-201ENST00000547436 487 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 OR4T1P-201ENST00000554933 911 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC044913.1-201ENST00000557200 430 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 MIR3690-201ENST00000580266 75 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 OR4G1P-201ENST00000588632 938 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AL365400.2-201ENST00000605604 902 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AL450489.1-201ENST00000612071 468 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC112200.1-201ENST00000625015 234 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC118273.1-201ENST00000525324 3006 ntBASIC3.14□□□□□ -1.91
CCDC71LQ8N9Z2 AC090337.1-201ENST00000579651 2074 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AC073429.2-201ENST00000569694 1444 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 RNU5E-10P-201ENST00000363506 118 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 RNU6-236P-201ENST00000363886 106 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 RNU6-374P-201ENST00000364146 108 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 RNA5SP509-201ENST00000364577 119 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 RNU6-619P-201ENST00000365146 108 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 MIR184-201ENST00000384962 84 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 FABP12P1-201ENST00000401911 322 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 RN7SKP33-201ENST00000410942 340 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 ELOCP19-201ENST00000411919 318 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 Z97055.1-201ENST00000419730 712 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AC005517.2-201ENST00000424673 553 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AL590762.4-201ENST00000425885 253 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 MRPS18BP2-201ENST00000434310 759 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 HMGN2P20-201ENST00000437531 273 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 PTGES3P1-201ENST00000439531 483 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 RPS23P7-201ENST00000466210 444 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms