Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC020910.3-201ENST00000603701 874 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AL118522.2-201ENST00000616045 615 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 ATP5A1P2-202ENST00000616464 443 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 PISRT1.1-201ENST00000616930 107 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AC007998.5-201ENST00000622938 237 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AC110801.1-201ENST00000623590 212 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AC005858.3-201ENST00000624756 589 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AL355480.1-201ENST00000629041 99 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AL731532.1-201ENST00000623972 4236 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AL591135.1-201ENST00000401578 5914 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AC074141.1-201ENST00000588129 2995 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 MTND5P30-201ENST00000452896 1731 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 PNPT1P2-201ENST00000456768 2050 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 RNU6-393P-201ENST00000384475 107 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 SNORA16.2-201ENST00000390991 127 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 ARSFP1-201ENST00000398758 477 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 AL033519.1-201ENST00000407266 307 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 MIR1250-201ENST00000408098 113 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 MIR1266-201ENST00000408125 84 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 AL591704.1-201ENST00000432574 275 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 RPEP4-201ENST00000437636 602 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 PPIAP10-201ENST00000438675 458 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 SNRPBP1-201ENST00000443634 282 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 GAPDHP27-201ENST00000447427 1020 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 AC022080.2-201ENST00000452932 533 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 SNRPCP3-201ENST00000474888 476 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 CR383656.1-201ENST00000484916 377 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 AC022790.1-201ENST00000522872 204 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 AC008269.2-201ENST00000561915 1105 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 MIR4310-201ENST00000582950 57 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 SAGE3P-201ENST00000619800 1635 ntBASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
DEPDC4Q8N2C3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 RNU6-1318P-201ENST00000365389 103 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 RNU6-890P-201ENST00000384121 107 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 MIR191-201ENST00000384873 92 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 RNA5SP474-201ENST00000391234 90 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 SNORA75.6-201ENST00000391318 127 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AL445189.1-201ENST00000405722 338 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AHCYP8-201ENST00000425108 209 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 FAR2P4-202ENST00000425399 584 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AC083862.1-201ENST00000427378 1242 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AL138899.2-201ENST00000439139 499 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AL445991.1-201ENST00000450381 475 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AL034369.1-201ENST00000453808 477 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 DHFRP3-201ENST00000455595 559 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 RNU6-1213P-201ENST00000517075 94 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms