Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC104010.1-201ENST00000616889 150 ntBASIC4.65□□□□□ -1.67
VRK3Q8IV63 AL445264.1-201ENST00000621719 171 ntBASIC4.65□□□□□ -1.67
VRK3Q8IV63 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VRK3Q8IV63 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
VRK3Q8IV63 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
VRK3Q8IV63 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VRK3Q8IV63 AC083843.3-201ENST00000623679 2186 ntBASIC4.65□□□□□ -1.67
VRK3Q8IV63 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VRK3Q8IV63 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
VRK3Q8IV63 AC093311.1-201ENST00000506586 2021 ntBASIC4.65□□□□□ -1.67
VRK3Q8IV63 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VRK3Q8IV63 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
VRK3Q8IV63 BTBD10P1-201ENST00000549824 1352 ntBASIC4.65□□□□□ -1.67
VRK3Q8IV63 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VRK3Q8IV63 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.65□□□□□ -1.67
VRK3Q8IV63 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC010928.1-201ENST00000592477 1447 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VRK3Q8IV63 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VRK3Q8IV63 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VRK3Q8IV63 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
VRK3Q8IV63 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VRK3Q8IV63 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VRK3Q8IV63 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VRK3Q8IV63 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 RNU6-492P-201ENST00000363035 104 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 RPL31P1-201ENST00000398116 372 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 RNU4-55P-201ENST00000410731 137 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 BOLA3P4-201ENST00000418151 400 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 SDCBPP3-201ENST00000419629 891 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VRK3Q8IV63 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC005154.2-201ENST00000438110 379 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC092809.1-201ENST00000441469 474 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC093019.1-201ENST00000443135 252 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 GAPDHP17-201ENST00000449858 1001 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 RNA5SP103-201ENST00000459503 118 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC091544.1-201ENST00000484702 348 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC012170.1-201ENST00000495139 359 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC114981.1-201ENST00000503897 678 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 KCTD9P2-201ENST00000512203 1013 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC108064.1-201ENST00000513791 460 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC109635.6-201ENST00000525487 1113 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 AL512310.1-201ENST00000548639 172 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC008126.1-201ENST00000549019 480 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC105129.1-201ENST00000560250 297 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 MIR4480-201ENST00000582492 71 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC009977.1-201ENST00000586015 570 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC022432.1-201ENST00000595739 310 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AL512782.1-201ENST00000603093 364 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 AL391358.1-201ENST00000605342 190 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 Mico1.1-201ENST00000611698 204 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VRK3Q8IV63 AL445487.1-201ENST00000415694 1580 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VRK3Q8IV63 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC046144.1-201ENST00000478559 1853 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 UGT2B26P-201ENST00000508672 1613 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VRK3Q8IV63 AC138915.3-201ENST00000562908 1389 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VRK3Q8IV63 NEAT1-202ENST00000501122 22743 ntBASIC4.64□□□□□ -1.67
VRK3Q8IV63 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VRK3Q8IV63 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VRK3Q8IV63 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VRK3Q8IV63 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VRK3Q8IV63 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VRK3Q8IV63 RNU4-44P-201ENST00000363050 141 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 RNA5SP87-201ENST00000384155 118 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 AL592291.1-201ENST00000403830 352 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 AL356776.1-201ENST00000406574 447 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 AL450338.1-201ENST00000407987 512 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VRK3Q8IV63 AL139128.1-201ENST00000413921 941 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 AC016769.2-201ENST00000414815 475 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 AC004690.1-201ENST00000418216 328 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms