Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LRRC28Q86X40 MTATP6P22-201ENST00000507369 598 ntBASIC2.85□□□□□ -1.95
LRRC28Q86X40 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.85□□□□□ -1.95
LRRC28Q86X40 PTGES3P3-201ENST00000511479 482 ntBASIC2.85□□□□□ -1.95
LRRC28Q86X40 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.85□□□□□ -1.95
LRRC28Q86X40 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.85□□□□□ -1.95
LRRC28Q86X40 RN7SKP116-201ENST00000516902 319 ntBASIC2.85□□□□□ -1.95
LRRC28Q86X40 SNORA31.26-201ENST00000517250 137 ntBASIC2.85□□□□□ -1.95
LRRC28Q86X40 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.85□□□□□ -1.95
LRRC28Q86X40 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.85□□□□□ -1.95
LRRC28Q86X40 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.85□□□□□ -1.95
LRRC28Q86X40 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.85□□□□□ -1.95
LRRC28Q86X40 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.85□□□□□ -1.95
LRRC28Q86X40 AC115989.2-201ENST00000578640 563 ntBASIC2.85□□□□□ -1.95
LRRC28Q86X40 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.85□□□□□ -1.95
LRRC28Q86X40 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.85□□□□□ -1.95
LRRC28Q86X40 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LRRC28Q86X40 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.85□□□□□ -1.95
LRRC28Q86X40 AC007179.3-201ENST00000604976 235 ntBASIC2.85□□□□□ -1.95
LRRC28Q86X40 AP005212.4-201ENST00000614206 710 ntBASIC2.85□□□□□ -1.95
LRRC28Q86X40 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.85□□□□□ -1.95
LRRC28Q86X40 AL590240.3-201ENST00000621416 943 ntBASIC2.85□□□□□ -1.95
LRRC28Q86X40 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.85□□□□□ -1.95
LRRC28Q86X40 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LRRC28Q86X40 DDX6P1-205ENST00000441966 1436 ntBASIC2.85□□□□□ -1.95
LRRC28Q86X40 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 AL353743.4-201ENST00000422653 1547 ntBASIC2.84□□□□□ -1.95
LRRC28Q86X40 HSPA8P19-201ENST00000505359 1517 ntBASIC2.84□□□□□ -1.95
LRRC28Q86X40 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LRRC28Q86X40 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 RNA5SP197-201ENST00000363357 119 ntBASIC2.84□□□□□ -1.95
LRRC28Q86X40 RNU6-356P-201ENST00000384140 107 ntBASIC2.84□□□□□ -1.95
LRRC28Q86X40 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 MIR887-201ENST00000401258 79 ntBASIC2.84□□□□□ -1.95
LRRC28Q86X40 RPL5P18-201ENST00000406671 891 ntBASIC2.84□□□□□ -1.95
LRRC28Q86X40 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LRRC28Q86X40 AC006994.1-201ENST00000438212 839 ntBASIC2.84□□□□□ -1.95
LRRC28Q86X40 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 RN7SL601P-201ENST00000471221 293 ntBASIC2.84□□□□□ -1.95
LRRC28Q86X40 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 ATG10-AS1-201ENST00000504846 648 ntBASIC2.84□□□□□ -1.95
LRRC28Q86X40 HSPD1P15-201ENST00000505573 1122 ntBASIC2.84□□□□□ -1.95
LRRC28Q86X40 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LRRC28Q86X40 CCNHP1-201ENST00000513311 678 ntBASIC2.84□□□□□ -1.95
LRRC28Q86X40 RN7SKP43-201ENST00000516173 320 ntBASIC2.84□□□□□ -1.95
LRRC28Q86X40 AF279873.1-201ENST00000523393 313 ntBASIC2.84□□□□□ -1.95
LRRC28Q86X40 OR4A2P-201ENST00000527276 913 ntBASIC2.84□□□□□ -1.95
LRRC28Q86X40 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 uc_338.9-201ENST00000617424 182 ntBASIC2.84□□□□□ -1.95
LRRC28Q86X40 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.84□□□□□ -1.95
LRRC28Q86X40 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
LRRC28Q86X40 Z83843.1-201ENST00000604070 3685 ntBASIC2.84□□□□□ -1.96
LRRC28Q86X40 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
LRRC28Q86X40 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
LRRC28Q86X40 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LRRC28Q86X40 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LRRC28Q86X40 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LRRC28Q86X40 RNU6-600P-201ENST00000362524 99 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 MIR607-201ENST00000385241 96 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 U3.19-201ENST00000390893 196 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 RNA5SP229-201ENST00000410809 99 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 BX323014.1-201ENST00000412876 237 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 KRR1P1-201ENST00000419430 803 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 RPF2P1-201ENST00000424137 906 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 OR6C71P-201ENST00000432580 913 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 RN7SL807P-201ENST00000470923 297 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 NCOR1P1-202ENST00000486162 291 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 OR4U1P-201ENST00000554958 912 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 AL031985.2-201ENST00000600955 480 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 AC012468.1-201ENST00000604888 430 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 AC096577.2-201ENST00000611455 153 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 AC116563.2-201ENST00000624751 535 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.83□□□□□ -1.96
LRRC28Q86X40 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.83□□□□□ -1.96
LRRC28Q86X40 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms