Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 TPMTP4-201ENST00000450749 678 ntBASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 ELOCP12-201ENST00000458706 328 ntBASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 PRELID3BP6-201ENST00000503839 571 ntBASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 AC006499.5-201ENST00000505037 514 ntBASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 SNX5P1-201ENST00000505757 1041 ntBASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 BNIP3P33-201ENST00000598912 569 ntBASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 AC091057.3-201ENST00000602684 733 ntBASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 AC103710.3-201ENST00000608157 948 ntBASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 AC093673.2-201ENST00000609674 331 ntBASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 AL357559.1-201ENST00000622228 274 ntBASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 AP003485.1-201ENST00000625093 753 ntBASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 USP8P1-201ENST00000494673 3183 ntBASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RFWD3Q6PCD5 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC025125.1-201ENST00000624743 1922 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 RNA5SP119-201ENST00000362715 117 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 RNU5E-10P-201ENST00000363506 118 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC009237.5-201ENST00000414271 501 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC246680.2-201ENST00000422106 389 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AL645638.1-201ENST00000440519 361 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 TPTE2P6-202ENST00000445572 1007 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AL050341.1-201ENST00000447743 313 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 PDSS1P2-201ENST00000449397 678 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 MTND2P8-201ENST00000450555 1025 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC073387.1-201ENST00000453261 709 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC099563.1-201ENST00000456086 418 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 snoU109.3-201ENST00000459477 145 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 RPL23AP62-201ENST00000463396 453 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AP000873.1-201ENST00000463987 400 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 NIPA2P2-201ENST00000496376 1083 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AL035404.1-201ENST00000497982 568 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 RANP9-201ENST00000519957 271 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 IGKV2-36-201ENST00000519999 223 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 OR5B10P-201ENST00000532869 642 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC020914.6-201ENST00000594327 272 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC008739.3-201ENST00000603262 127 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC024220.1-201ENST00000603675 484 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC069431.2-201ENST00000604149 1099 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AL121652.1-201ENST00000608851 448 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC084824.4-201ENST00000620106 731 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC244100.1-202ENST00000621554 382 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 OR4G3P-201ENST00000633500 913 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC138649.5-201ENST00000637456 137 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 AC106871.1-201ENST00000568324 3102 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 MAPK10-372ENST00000641954 3413 ntBASIC3.72□□□□□ -1.81
RFWD3Q6PCD5 NSRP1P1-201ENST00000444067 1693 ntBASIC3.71□□□□□ -1.81
RFWD3Q6PCD5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
RFWD3Q6PCD5 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
RFWD3Q6PCD5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RFWD3Q6PCD5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RFWD3Q6PCD5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RFWD3Q6PCD5 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.71□□□□□ -1.82
RFWD3Q6PCD5 RNU6-1339P-201ENST00000363574 91 ntBASIC3.71□□□□□ -1.82
RFWD3Q6PCD5 SNORA72.3-201ENST00000365074 132 ntBASIC3.71□□□□□ -1.82
RFWD3Q6PCD5 MIR218-2-201ENST00000385006 110 ntBASIC3.71□□□□□ -1.82
RFWD3Q6PCD5 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RFWD3Q6PCD5 AL603865.2-201ENST00000401679 213 ntBASIC3.71□□□□□ -1.82
RFWD3Q6PCD5 RN7SKP285-201ENST00000410137 318 ntBASIC3.71□□□□□ -1.82
RFWD3Q6PCD5 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.71□□□□□ -1.82
RFWD3Q6PCD5 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.71□□□□□ -1.82
RFWD3Q6PCD5 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.71□□□□□ -1.82
RFWD3Q6PCD5 AL159169.1-201ENST00000421119 127 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms