Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.21□□□□□ -1.74
ZNF549Q6P9A3 AC093311.1-201ENST00000506586 2021 ntBASIC4.21□□□□□ -1.74
ZNF549Q6P9A3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 RNU4-91P-201ENST00000364778 135 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 U3.22-201ENST00000391120 215 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AL121834.1-202ENST00000404494 277 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 RPS4XP9-201ENST00000405151 780 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 MIR548F1-201ENST00000408667 84 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 RN7SKP33-201ENST00000410942 340 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 RNA5SP498-201ENST00000411342 120 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC068533.2-201ENST00000411872 306 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 OR8G2P-201ENST00000412796 908 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 RPS7P13-201ENST00000413955 498 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC004690.1-201ENST00000418216 328 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC245028.1-201ENST00000423259 256 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 RPS29P17-201ENST00000430795 166 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC011998.1-201ENST00000433403 117 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC069285.2-201ENST00000440210 275 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 CEACAMP9-201ENST00000442990 513 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AL035551.1-201ENST00000446931 348 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 NPM1P39-201ENST00000449818 867 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 PNPLA4P1-201ENST00000458328 305 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 RNA5SP269-201ENST00000459032 137 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 snoU13.1-201ENST00000459157 104 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC104685.1-201ENST00000502445 371 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC025445.1-201ENST00000502728 300 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 PARP4P3-201ENST00000510265 317 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC074029.1-201ENST00000552531 1044 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC084757.1-201ENST00000559987 490 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 VN1R92P-201ENST00000598511 928 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC068790.4-201ENST00000602474 263 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC005191.1-201ENST00000603950 358 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC008745.1-201ENST00000604064 271 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC068276.1-201ENST00000605793 379 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 RN7SL722P-201ENST00000617780 284 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 RN7SL565P-201ENST00000618246 284 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC095031.1-201ENST00000623685 672 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 AC010300.1-201ENST00000600671 5134 ntBASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZNF549Q6P9A3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 Y_RNA.18-201ENST00000362461 102 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RNU1-14P-201ENST00000362759 152 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RNU5D-1-201ENST00000363299 116 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 Y_RNA.248-201ENST00000364501 109 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RNU6-660P-201ENST00000364566 109 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RHOT1P2-201ENST00000366423 333 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RNU6-348P-201ENST00000384386 107 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 MIR513A2-201ENST00000385249 127 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AL161909.1-201ENST00000397390 712 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RNA5SP104-201ENST00000410989 118 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AL160275.2-201ENST00000412010 394 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RPS15AP38-201ENST00000413110 372 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AC114814.2-201ENST00000419195 485 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 MTND1P28-201ENST00000435623 950 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AC104306.1-201ENST00000449702 371 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 BX248409.1-201ENST00000455497 255 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RPL7P48-201ENST00000461513 746 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AC010469.1-201ENST00000463864 576 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RN7SL738P-201ENST00000470264 297 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 RN7SL459P-201ENST00000481078 302 ntBASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.19□□□□□ -1.74
ZNF549Q6P9A3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms