Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AL731566.1-201ENST00000620490 1937 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 U3.2-201ENST00000362981 210 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 RNU6-317P-201ENST00000384031 107 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AL031985.1-201ENST00000392713 418 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 RN7SKP140-201ENST00000411196 284 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 RNU2-18P-201ENST00000411224 162 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 ELOCP4-201ENST00000420090 333 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 RPS24P8-201ENST00000431490 402 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 RPS3AP54-201ENST00000435535 734 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 SPRYD7P1-201ENST00000443861 570 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AL136380.1-201ENST00000447970 162 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 Y_RNA.632-201ENST00000459189 102 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 RPS3AP50-201ENST00000487064 803 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 RNU6-513P-201ENST00000516104 104 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 RN7SKP116-201ENST00000516902 319 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AC027308.1-201ENST00000517993 110 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 BNIP3P1-201ENST00000547295 580 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 MIR3167-201ENST00000579623 85 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AC004853.1-201ENST00000604902 698 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AC040896.1-201ENST00000613819 479 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AC233309.1-201ENST00000619522 751 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AC009161.2-201ENST00000624626 138 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AC138305.3-201ENST00000624988 240 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 MTCO1P9-201ENST00000505577 1534 ntBASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKAL1Q5VV42 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 HSPA8P14-201ENST00000552265 1805 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 RNU6-1120P-201ENST00000362988 108 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 RNU6-952P-201ENST00000391164 108 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AC009804.1-201ENST00000400949 179 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 SNORA77-201ENST00000408716 125 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 RNU6-1148P-201ENST00000410992 104 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 RN7SKP293-201ENST00000411389 296 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 RPL26P29-201ENST00000415623 438 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 RPL12P18-201ENST00000437175 325 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 RPS29P9-201ENST00000440360 171 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AL161722.1-201ENST00000446972 1032 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AL691482.1-201ENST00000453255 87 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 SBDSP1-204ENST00000453858 737 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 RN7SL443P-201ENST00000464331 290 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 RN7SL184P-201ENST00000488308 297 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 PCBP2P3-201ENST00000509726 843 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 RNA5SP401-201ENST00000515920 127 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 IGKV2-36-201ENST00000519999 223 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AC022616.6-201ENST00000520479 119 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AP003072.2-201ENST00000527756 676 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AC093249.1-201ENST00000567049 203 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 MIR3171-201ENST00000584270 74 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 AC021646.1-201ENST00000605469 484 ntBASIC5.56□□□□□ -1.52
CDKAL1Q5VV42 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms