Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 MIR2114-201ENST00000516645 80 ntBASIC4.65□□□□□ -1.66
SNAPC4Q5SXM2 AP003122.3-201ENST00000526316 255 ntBASIC4.65□□□□□ -1.66
SNAPC4Q5SXM2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SNAPC4Q5SXM2 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.65□□□□□ -1.66
SNAPC4Q5SXM2 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SNAPC4Q5SXM2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNAPC4Q5SXM2 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.65□□□□□ -1.67
SNAPC4Q5SXM2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 MTND5P24-201ENST00000438892 1767 ntBASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 RPL7P26-201ENST00000333817 754 ntBASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 RNU6-482P-201ENST00000391068 107 ntBASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 U3.42-201ENST00000408746 214 ntBASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 RPL7P12-201ENST00000446719 750 ntBASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 AC117522.3-201ENST00000507974 584 ntBASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 OR10D4P-201ENST00000525892 951 ntBASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 AC241585.2-209ENST00000638217 143 ntBASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 AC092079.1-201ENST00000558620 1985 ntBASIC4.64□□□□□ -1.67
SNAPC4Q5SXM2 RNA5SP289-201ENST00000362332 137 ntBASIC4.63□□□□□ -1.67
SNAPC4Q5SXM2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.63□□□□□ -1.67
SNAPC4Q5SXM2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.63□□□□□ -1.67
SNAPC4Q5SXM2 AL162389.1-201ENST00000449233 177 ntBASIC4.63□□□□□ -1.67
SNAPC4Q5SXM2 FGF7P3-201ENST00000454645 303 ntBASIC4.63□□□□□ -1.67
SNAPC4Q5SXM2 AC019227.1-201ENST00000526902 510 ntBASIC4.63□□□□□ -1.67
SNAPC4Q5SXM2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNAPC4Q5SXM2 AL365503.1-201ENST00000605247 905 ntBASIC4.63□□□□□ -1.67
SNAPC4Q5SXM2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SNAPC4Q5SXM2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.63□□□□□ -1.67
SNAPC4Q5SXM2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 AL031736.2-201ENST00000426573 787 ntBASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 AL365396.1-201ENST00000430854 671 ntBASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 RPS26P40-201ENST00000435209 294 ntBASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 RN7SKP283-201ENST00000517197 270 ntBASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 AL356057.3-201ENST00000402607 340 ntBASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 ATF1P1-201ENST00000406040 927 ntBASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 Z82195.1-201ENST00000604558 398 ntBASIC4.62□□□□□ -1.67
SNAPC4Q5SXM2 AC134882.1-201ENST00000603738 1676 ntBASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 AC008725.1-201ENST00000605123 2263 ntBASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 AL049555.1-201ENST00000562834 1933 ntBASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 RNU1-75P-201ENST00000347264 129 ntBASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 Y_RNA.226-201ENST00000364337 114 ntBASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 AL079342.1-201ENST00000401460 267 ntBASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 RPS4XP7-201ENST00000406274 780 ntBASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 AL049610.1-201ENST00000423374 372 ntBASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 GTF2IP23-201ENST00000423746 351 ntBASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 OR5H3P-201ENST00000502817 919 ntBASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 AC015911.5-201ENST00000587076 451 ntBASIC4.61□□□□□ -1.67
SNAPC4Q5SXM2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 MTCO1P22-201ENST00000604619 1360 ntBASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 Z98941.1-201ENST00000407764 100 ntBASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 SETP10-201ENST00000424368 814 ntBASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 UBE2D3P1-201ENST00000436669 444 ntBASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 AC133473.1-201ENST00000455173 299 ntBASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 SNORA31.21-201ENST00000517180 77 ntBASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 DEFB122-202ENST00000569013 197 ntBASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 DNAJC19P3-201ENST00000594491 331 ntBASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 AC025754.2-201ENST00000606491 432 ntBASIC4.6□□□□□ -1.67
SNAPC4Q5SXM2 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms