Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC034268.2-201ENST00000571784 482 ntBASIC2.74□□□□□ -1.97
UBA52P62987 MIR5004-201ENST00000579078 107 ntBASIC2.74□□□□□ -1.97
UBA52P62987 CKS1BP3-201ENST00000600888 237 ntBASIC2.74□□□□□ -1.97
UBA52P62987 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.74□□□□□ -1.97
UBA52P62987 SNORD39.4-201ENST00000620099 78 ntBASIC2.74□□□□□ -1.97
UBA52P62987 MIR6852-201ENST00000621699 66 ntBASIC2.74□□□□□ -1.97
UBA52P62987 AL356490.1-201ENST00000623079 479 ntBASIC2.74□□□□□ -1.97
UBA52P62987 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.74□□□□□ -1.97
UBA52P62987 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.74□□□□□ -1.97
UBA52P62987 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
UBA52P62987 MTND5P24-201ENST00000438892 1767 ntBASIC2.74□□□□□ -1.97
UBA52P62987 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.74□□□□□ -1.97
UBA52P62987 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.73□□□□□ -1.97
UBA52P62987 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
UBA52P62987 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
UBA52P62987 AC236972.1-201ENST00000433225 199 ntBASIC2.73□□□□□ -1.97
UBA52P62987 RPL27AP5-201ENST00000469428 449 ntBASIC2.73□□□□□ -1.97
UBA52P62987 RPS3AP14-201ENST00000483907 780 ntBASIC2.73□□□□□ -1.97
UBA52P62987 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.73□□□□□ -1.97
UBA52P62987 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.73□□□□□ -1.97
UBA52P62987 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.73□□□□□ -1.97
UBA52P62987 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.73□□□□□ -1.97
UBA52P62987 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.73□□□□□ -1.97
UBA52P62987 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.73□□□□□ -1.97
UBA52P62987 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.73□□□□□ -1.97
UBA52P62987 AC107871.2-201ENST00000612894 502 ntBASIC2.73□□□□□ -1.97
UBA52P62987 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.73□□□□□ -1.97
UBA52P62987 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.73□□□□□ -1.97
UBA52P62987 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
UBA52P62987 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.73□□□□□ -1.97
UBA52P62987 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.73□□□□□ -1.97
UBA52P62987 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
UBA52P62987 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
UBA52P62987 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
UBA52P62987 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.72□□□□□ -1.97
UBA52P62987 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
UBA52P62987 DCAF13P1-201ENST00000495256 1330 ntBASIC2.72□□□□□ -1.97
UBA52P62987 DCAF13P3-201ENST00000561147 1334 ntBASIC2.72□□□□□ -1.97
UBA52P62987 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.72□□□□□ -1.97
UBA52P62987 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
UBA52P62987 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
UBA52P62987 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
UBA52P62987 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
UBA52P62987 RPL5P18-201ENST00000406671 891 ntBASIC2.72□□□□□ -1.97
UBA52P62987 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.72□□□□□ -1.97
UBA52P62987 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
UBA52P62987 AL353678.1-201ENST00000422735 741 ntBASIC2.72□□□□□ -1.97
UBA52P62987 RPL7P46-201ENST00000425129 740 ntBASIC2.72□□□□□ -1.97
UBA52P62987 RPL7P59-201ENST00000447700 943 ntBASIC2.72□□□□□ -1.97
UBA52P62987 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.72□□□□□ -1.97
UBA52P62987 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.72□□□□□ -1.97
UBA52P62987 RPL21P13-201ENST00000488305 481 ntBASIC2.72□□□□□ -1.97
UBA52P62987 RPL5P23-201ENST00000496040 868 ntBASIC2.72□□□□□ -1.97
UBA52P62987 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.72□□□□□ -1.97
UBA52P62987 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.72□□□□□ -1.97
UBA52P62987 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.72□□□□□ -1.97
UBA52P62987 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.72□□□□□ -1.97
UBA52P62987 HIGD1AP3-201ENST00000515857 278 ntBASIC2.72□□□□□ -1.97
UBA52P62987 RN7SKP43-201ENST00000516173 320 ntBASIC2.72□□□□□ -1.97
UBA52P62987 RNA5SP341-201ENST00000516261 117 ntBASIC2.72□□□□□ -1.97
UBA52P62987 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.72□□□□□ -1.97
UBA52P62987 FAM35CP-201ENST00000554755 2470 ntBASIC2.72□□□□□ -1.97
UBA52P62987 EIF4BP1-201ENST00000554881 351 ntBASIC2.72□□□□□ -1.97
UBA52P62987 AL121594.4-201ENST00000556211 1196 ntBASIC2.72□□□□□ -1.97
UBA52P62987 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.72□□□□□ -1.97
UBA52P62987 MTCO3P13-201ENST00000577757 781 ntBASIC2.72□□□□□ -1.97
UBA52P62987 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.72□□□□□ -1.97
UBA52P62987 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.72□□□□□ -1.97
UBA52P62987 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.72□□□□□ -1.97
UBA52P62987 AC011468.4-201ENST00000603942 409 ntBASIC2.72□□□□□ -1.97
UBA52P62987 AL451074.6-201ENST00000608512 729 ntBASIC2.72□□□□□ -1.97
UBA52P62987 AC091903.1-201ENST00000624322 454 ntBASIC2.72□□□□□ -1.97
UBA52P62987 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
UBA52P62987 AL365361.1-201ENST00000566942 3481 ntBASIC2.72□□□□□ -1.97
UBA52P62987 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
UBA52P62987 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
UBA52P62987 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
UBA52P62987 API5P2-201ENST00000397055 1498 ntBASIC2.71□□□□□ -1.97
UBA52P62987 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
UBA52P62987 DDX6P1-205ENST00000441966 1436 ntBASIC2.71□□□□□ -1.98
UBA52P62987 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
UBA52P62987 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
UBA52P62987 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
UBA52P62987 AL357075.1-201ENST00000404107 726 ntBASIC2.71□□□□□ -1.98
UBA52P62987 RSL24D1P1-201ENST00000404972 493 ntBASIC2.71□□□□□ -1.98
UBA52P62987 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.71□□□□□ -1.98
UBA52P62987 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.71□□□□□ -1.98
UBA52P62987 AL139281.1-201ENST00000422120 335 ntBASIC2.71□□□□□ -1.98
UBA52P62987 COTL1P1-201ENST00000422309 375 ntBASIC2.71□□□□□ -1.98
UBA52P62987 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.71□□□□□ -1.98
UBA52P62987 Z75741.1-201ENST00000446793 314 ntBASIC2.71□□□□□ -1.98
UBA52P62987 UBE2DNL-203ENST00000474922 222 ntBASIC2.71□□□□□ -1.98
UBA52P62987 RPS3AP43-201ENST00000479743 781 ntBASIC2.71□□□□□ -1.98
UBA52P62987 AP004217.1-201ENST00000480579 346 ntBASIC2.71□□□□□ -1.98
UBA52P62987 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.71□□□□□ -1.98
UBA52P62987 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.71□□□□□ -1.98
UBA52P62987 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.71□□□□□ -1.98
UBA52P62987 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.71□□□□□ -1.98
UBA52P62987 OR4R3P-201ENST00000525084 838 ntBASIC2.71□□□□□ -1.98
UBA52P62987 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms