Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RN7SL293P-201ENST00000481765 281 ntBASIC3.85□□□□□ -1.79
PEX3P56589 NIPA2P2-201ENST00000496376 1083 ntBASIC3.85□□□□□ -1.79
PEX3P56589 RPL7P47-201ENST00000497299 556 ntBASIC3.85□□□□□ -1.79
PEX3P56589 SUMO2P5-201ENST00000506790 245 ntBASIC3.85□□□□□ -1.79
PEX3P56589 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PEX3P56589 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.85□□□□□ -1.79
PEX3P56589 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.85□□□□□ -1.79
PEX3P56589 AP006245.1-201ENST00000522549 120 ntBASIC3.85□□□□□ -1.79
PEX3P56589 AC010306.1-201ENST00000523223 1117 ntBASIC3.85□□□□□ -1.79
PEX3P56589 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.85□□□□□ -1.79
PEX3P56589 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.85□□□□□ -1.79
PEX3P56589 AC026333.2-201ENST00000542164 106 ntBASIC3.85□□□□□ -1.79
PEX3P56589 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.85□□□□□ -1.79
PEX3P56589 DUXAP6-201ENST00000553858 601 ntBASIC3.85□□□□□ -1.79
PEX3P56589 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.85□□□□□ -1.79
PEX3P56589 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.85□□□□□ -1.79
PEX3P56589 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.85□□□□□ -1.79
PEX3P56589 AC090751.1-201ENST00000566966 267 ntBASIC3.85□□□□□ -1.79
PEX3P56589 AC023824.3-201ENST00000569003 562 ntBASIC3.85□□□□□ -1.79
PEX3P56589 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.85□□□□□ -1.79
PEX3P56589 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
PEX3P56589 VN1R87P-201ENST00000596706 487 ntBASIC3.85□□□□□ -1.79
PEX3P56589 AC008739.3-201ENST00000603262 127 ntBASIC3.85□□□□□ -1.79
PEX3P56589 AC069431.2-201ENST00000604149 1099 ntBASIC3.85□□□□□ -1.79
PEX3P56589 AC092354.2-201ENST00000607786 514 ntBASIC3.85□□□□□ -1.79
PEX3P56589 AL355816.1-201ENST00000607951 118 ntBASIC3.85□□□□□ -1.79
PEX3P56589 RNU6-1192P-201ENST00000612197 107 ntBASIC3.85□□□□□ -1.79
PEX3P56589 RNU6-489P-201ENST00000618289 107 ntBASIC3.85□□□□□ -1.79
PEX3P56589 AC084824.4-201ENST00000620106 731 ntBASIC3.85□□□□□ -1.79
PEX3P56589 MIR6075-201ENST00000620782 95 ntBASIC3.85□□□□□ -1.79
PEX3P56589 CR392039.4-201ENST00000624968 501 ntBASIC3.85□□□□□ -1.79
PEX3P56589 AC010608.3-201ENST00000625048 527 ntBASIC3.85□□□□□ -1.79
PEX3P56589 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.85□□□□□ -1.79
PEX3P56589 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PEX3P56589 RPS4XP5-202ENST00000449995 1334 ntBASIC3.85□□□□□ -1.79
PEX3P56589 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PEX3P56589 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PEX3P56589 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.85□□□□□ -1.79
PEX3P56589 AC073055.1-201ENST00000456901 1621 ntBASIC3.84□□□□□ -1.79
PEX3P56589 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PEX3P56589 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PEX3P56589 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.84□□□□□ -1.79
PEX3P56589 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.84□□□□□ -1.79
PEX3P56589 AL118496.1-201ENST00000440201 1812 ntBASIC3.84□□□□□ -1.79
PEX3P56589 RNU6-353P-201ENST00000364266 108 ntBASIC3.84□□□□□ -1.79
PEX3P56589 MIR490-201ENST00000384865 128 ntBASIC3.84□□□□□ -1.79
PEX3P56589 RNU6-298P-201ENST00000390888 96 ntBASIC3.84□□□□□ -1.79
PEX3P56589 SNORD17-201ENST00000390930 237 ntBASIC3.84□□□□□ -1.79
PEX3P56589 SNORA11C-201ENST00000408532 129 ntBASIC3.84□□□□□ -1.79
PEX3P56589 RPS3AP25-201ENST00000411660 793 ntBASIC3.84□□□□□ -1.79
PEX3P56589 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.84□□□□□ -1.79
PEX3P56589 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.84□□□□□ -1.79
PEX3P56589 AC068533.1-201ENST00000418542 415 ntBASIC3.84□□□□□ -1.79
PEX3P56589 YME1L1P1-201ENST00000429435 297 ntBASIC3.84□□□□□ -1.79
PEX3P56589 AL050321.1-201ENST00000432363 400 ntBASIC3.84□□□□□ -1.79
PEX3P56589 HMGB1P45-201ENST00000435986 653 ntBASIC3.84□□□□□ -1.79
PEX3P56589 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.84□□□□□ -1.79
PEX3P56589 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.84□□□□□ -1.79
PEX3P56589 AL358232.1-201ENST00000448030 501 ntBASIC3.84□□□□□ -1.79
PEX3P56589 RPL26P28-201ENST00000451325 435 ntBASIC3.84□□□□□ -1.79
PEX3P56589 TVP23BP2-201ENST00000455082 615 ntBASIC3.84□□□□□ -1.79
PEX3P56589 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.84□□□□□ -1.79
PEX3P56589 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.84□□□□□ -1.79
PEX3P56589 SETP14-201ENST00000497538 873 ntBASIC3.84□□□□□ -1.79
PEX3P56589 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.84□□□□□ -1.79
PEX3P56589 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.84□□□□□ -1.79
PEX3P56589 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.84□□□□□ -1.79
PEX3P56589 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.84□□□□□ -1.79
PEX3P56589 AP001207.2-201ENST00000519490 539 ntBASIC3.84□□□□□ -1.79
PEX3P56589 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.84□□□□□ -1.79
PEX3P56589 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.84□□□□□ -1.79
PEX3P56589 AC139103.1-201ENST00000534696 1030 ntBASIC3.84□□□□□ -1.79
PEX3P56589 AC006518.2-201ENST00000542513 940 ntBASIC3.84□□□□□ -1.79
PEX3P56589 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.84□□□□□ -1.79
PEX3P56589 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.84□□□□□ -1.79
PEX3P56589 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.84□□□□□ -1.79
PEX3P56589 MTCO1P40-201ENST00000574371 625 ntBASIC3.84□□□□□ -1.79
PEX3P56589 AC053481.3-201ENST00000577881 843 ntBASIC3.84□□□□□ -1.79
PEX3P56589 AC090330.1-201ENST00000588646 764 ntBASIC3.84□□□□□ -1.79
PEX3P56589 Z82195.1-201ENST00000604558 398 ntBASIC3.84□□□□□ -1.79
PEX3P56589 AL713922.2-201ENST00000619384 716 ntBASIC3.84□□□□□ -1.79
PEX3P56589 OR4G3P-201ENST00000633500 913 ntBASIC3.84□□□□□ -1.79
PEX3P56589 AC139713.2-210ENST00000641741 992 ntBASIC3.84□□□□□ -1.79
PEX3P56589 BX649567.1-201ENST00000642071 1134 ntBASIC3.84□□□□□ -1.79
PEX3P56589 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PEX3P56589 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PEX3P56589 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PEX3P56589 NMD3P1-201ENST00000439704 1488 ntBASIC3.84□□□□□ -1.8
PEX3P56589 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PEX3P56589 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PEX3P56589 AL645937.1-201ENST00000641739 1652 ntBASIC3.84□□□□□ -1.8
PEX3P56589 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PEX3P56589 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
PEX3P56589 RNU6-236P-201ENST00000363886 106 ntBASIC3.83□□□□□ -1.8
PEX3P56589 RNU6-146P-201ENST00000384602 108 ntBASIC3.83□□□□□ -1.8
PEX3P56589 MCTS2P-201ENST00000394552 546 ntBASIC3.83□□□□□ -1.8
PEX3P56589 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.83□□□□□ -1.8
PEX3P56589 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.83□□□□□ -1.8
PEX3P56589 AC246680.2-201ENST00000422106 389 ntBASIC3.83□□□□□ -1.8
PEX3P56589 AC009965.2-201ENST00000425328 970 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms