Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC008481.1-201ENST00000463278 396 ntBASIC3.42□□□□□ -1.86
NUP98P52948 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.42□□□□□ -1.86
NUP98P52948 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
NUP98P52948 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.42□□□□□ -1.86
NUP98P52948 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.42□□□□□ -1.86
NUP98P52948 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.42□□□□□ -1.86
NUP98P52948 AC026790.2-201ENST00000606282 430 ntBASIC3.42□□□□□ -1.86
NUP98P52948 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.42□□□□□ -1.86
NUP98P52948 AC009039.2-201ENST00000624524 529 ntBASIC3.42□□□□□ -1.86
NUP98P52948 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.42□□□□□ -1.86
NUP98P52948 RLIMP2-201ENST00000427891 1563 ntBASIC3.42□□□□□ -1.86
NUP98P52948 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NUP98P52948 MAPK10-362ENST00000641864 4484 ntBASIC3.41□□□□□ -1.86
NUP98P52948 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NUP98P52948 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.41□□□□□ -1.86
NUP98P52948 MYL8P-204ENST00000431574 518 ntBASIC3.41□□□□□ -1.86
NUP98P52948 HMGB3P10-201ENST00000434734 572 ntBASIC3.41□□□□□ -1.86
NUP98P52948 AL513043.1-201ENST00000439124 535 ntBASIC3.41□□□□□ -1.86
NUP98P52948 AC090281.1-201ENST00000523019 276 ntBASIC3.41□□□□□ -1.86
NUP98P52948 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.41□□□□□ -1.86
NUP98P52948 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.41□□□□□ -1.86
NUP98P52948 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.41□□□□□ -1.86
NUP98P52948 AC025946.2-201ENST00000603398 234 ntBASIC3.41□□□□□ -1.86
NUP98P52948 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.41□□□□□ -1.86
NUP98P52948 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
NUP98P52948 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NUP98P52948 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.4□□□□□ -1.86
NUP98P52948 RNU6-1320P-201ENST00000390838 107 ntBASIC3.4□□□□□ -1.86
NUP98P52948 RNU6-1269P-201ENST00000391139 107 ntBASIC3.4□□□□□ -1.86
NUP98P52948 AL360182.1-201ENST00000397433 468 ntBASIC3.4□□□□□ -1.86
NUP98P52948 AC013268.2-201ENST00000420753 337 ntBASIC3.4□□□□□ -1.86
NUP98P52948 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.4□□□□□ -1.86
NUP98P52948 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.4□□□□□ -1.86
NUP98P52948 AC007563.3-201ENST00000433233 371 ntBASIC3.4□□□□□ -1.86
NUP98P52948 AL138787.1-202ENST00000437804 898 ntBASIC3.4□□□□□ -1.86
NUP98P52948 AC099063.2-201ENST00000446360 662 ntBASIC3.4□□□□□ -1.86
NUP98P52948 AC125238.1-201ENST00000448842 249 ntBASIC3.4□□□□□ -1.86
NUP98P52948 RNU6-599P-201ENST00000459383 107 ntBASIC3.4□□□□□ -1.86
NUP98P52948 RNU6-1193P-201ENST00000459461 107 ntBASIC3.4□□□□□ -1.86
NUP98P52948 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.4□□□□□ -1.86
NUP98P52948 RNA5SP320-201ENST00000516263 124 ntBASIC3.4□□□□□ -1.86
NUP98P52948 snoU109.6-201ENST00000516831 118 ntBASIC3.4□□□□□ -1.86
NUP98P52948 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.4□□□□□ -1.86
NUP98P52948 AC131238.1-201ENST00000617135 328 ntBASIC3.4□□□□□ -1.86
NUP98P52948 RNU6-368P-201ENST00000620928 107 ntBASIC3.4□□□□□ -1.86
NUP98P52948 RNU6-538P-201ENST00000622329 107 ntBASIC3.4□□□□□ -1.86
NUP98P52948 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.4□□□□□ -1.87
NUP98P52948 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
NUP98P52948 AMD1P2-201ENST00000412936 992 ntBASIC3.4□□□□□ -1.87
NUP98P52948 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.4□□□□□ -1.87
NUP98P52948 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.4□□□□□ -1.87
NUP98P52948 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NUP98P52948 RN7SL75P-201ENST00000461926 281 ntBASIC3.4□□□□□ -1.87
NUP98P52948 AL035404.1-201ENST00000497982 568 ntBASIC3.4□□□□□ -1.87
NUP98P52948 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.4□□□□□ -1.87
NUP98P52948 AC068657.1-201ENST00000520807 306 ntBASIC3.4□□□□□ -1.87
NUP98P52948 MIR7153-201ENST00000637758 57 ntBASIC3.4□□□□□ -1.87
NUP98P52948 ELF2P3-201ENST00000445099 1506 ntBASIC3.39□□□□□ -1.87
NUP98P52948 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
NUP98P52948 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NUP98P52948 RN7SKP284-201ENST00000411002 343 ntBASIC3.39□□□□□ -1.87
NUP98P52948 RPL32P28-201ENST00000443577 397 ntBASIC3.39□□□□□ -1.87
NUP98P52948 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.39□□□□□ -1.87
NUP98P52948 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.39□□□□□ -1.87
NUP98P52948 AC091544.4-201ENST00000555268 342 ntBASIC3.39□□□□□ -1.87
NUP98P52948 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.39□□□□□ -1.87
NUP98P52948 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.39□□□□□ -1.87
NUP98P52948 AC087468.1-201ENST00000604365 630 ntBASIC3.39□□□□□ -1.87
NUP98P52948 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
NUP98P52948 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NUP98P52948 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
NUP98P52948 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.38□□□□□ -1.87
NUP98P52948 TAB3P1-202ENST00000452645 1634 ntBASIC3.38□□□□□ -1.87
NUP98P52948 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NUP98P52948 RSL24D1P4-201ENST00000400938 484 ntBASIC3.38□□□□□ -1.87
NUP98P52948 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NUP98P52948 OOSP1P1-201ENST00000423265 274 ntBASIC3.38□□□□□ -1.87
NUP98P52948 Z93242.1-201ENST00000427102 353 ntBASIC3.38□□□□□ -1.87
NUP98P52948 AC112220.1-201ENST00000434628 355 ntBASIC3.38□□□□□ -1.87
NUP98P52948 B3GNT2P1-201ENST00000434960 952 ntBASIC3.38□□□□□ -1.87
NUP98P52948 AL513328.1-201ENST00000446460 224 ntBASIC3.38□□□□□ -1.87
NUP98P52948 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.38□□□□□ -1.87
NUP98P52948 RPS27AP1-201ENST00000475545 471 ntBASIC3.38□□□□□ -1.87
NUP98P52948 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.38□□□□□ -1.87
NUP98P52948 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.38□□□□□ -1.87
NUP98P52948 AC005046.1-201ENST00000608515 625 ntBASIC3.38□□□□□ -1.87
NUP98P52948 AC090115.4-201ENST00000609970 188 ntBASIC3.38□□□□□ -1.87
NUP98P52948 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.38□□□□□ -1.87
NUP98P52948 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NUP98P52948 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.38□□□□□ -1.87
NUP98P52948 AC107015.1-201ENST00000466902 747 ntBASIC3.37□□□□□ -1.87
NUP98P52948 HMGB1P25-201ENST00000468402 607 ntBASIC3.37□□□□□ -1.87
NUP98P52948 RN7SL330P-201ENST00000469709 307 ntBASIC3.37□□□□□ -1.87
NUP98P52948 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.37□□□□□ -1.87
NUP98P52948 AC093755.1-201ENST00000512950 1023 ntBASIC3.37□□□□□ -1.87
NUP98P52948 SNORD39.2-201ENST00000579995 76 ntBASIC3.37□□□□□ -1.87
NUP98P52948 MIR6817-201ENST00000615588 66 ntBASIC3.37□□□□□ -1.87
NUP98P52948 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.37□□□□□ -1.87
NUP98P52948 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
NUP98P52948 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms