Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.95□□□□□ -1.94
BRCA2P51587 AC008716.1-201ENST00000511084 513 ntBASIC2.95□□□□□ -1.94
BRCA2P51587 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
BRCA2P51587 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.95□□□□□ -1.94
BRCA2P51587 AC004696.1-201ENST00000614345 607 ntBASIC2.95□□□□□ -1.94
BRCA2P51587 MTND5P6-201ENST00000422338 1798 ntBASIC2.95□□□□□ -1.94
BRCA2P51587 YES1-203ENST00000577961 4554 ntTSL 5 BASIC2.95□□□□□ -1.94
BRCA2P51587 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
BRCA2P51587 RPL23AP4-201ENST00000427757 463 ntBASIC2.94□□□□□ -1.94
BRCA2P51587 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.94□□□□□ -1.94
BRCA2P51587 AC055855.1-201ENST00000489563 579 ntBASIC2.94□□□□□ -1.94
BRCA2P51587 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC2.94□□□□□ -1.94
BRCA2P51587 AP001317.1-201ENST00000531194 960 ntBASIC2.94□□□□□ -1.94
BRCA2P51587 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
BRCA2P51587 AC009101.1-201ENST00000568135 242 ntBASIC2.94□□□□□ -1.94
BRCA2P51587 AP003117.2-201ENST00000606010 545 ntBASIC2.94□□□□□ -1.94
BRCA2P51587 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.94□□□□□ -1.94
BRCA2P51587 AC000123.3-201ENST00000624029 4975 ntBASIC2.94□□□□□ -1.94
BRCA2P51587 SNORD114-1-201ENST00000362705 72 ntBASIC2.94□□□□□ -1.94
BRCA2P51587 RANP7-201ENST00000418085 644 ntBASIC2.94□□□□□ -1.94
BRCA2P51587 AC108078.3-201ENST00000502633 489 ntBASIC2.94□□□□□ -1.94
BRCA2P51587 AC244205.2-202ENST00000635781 342 ntBASIC2.94□□□□□ -1.94
BRCA2P51587 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.94□□□□□ -1.94
BRCA2P51587 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC2.94□□□□□ -1.94
BRCA2P51587 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC2.94□□□□□ -1.94
BRCA2P51587 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
BRCA2P51587 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC2.94□□□□□ -1.94
BRCA2P51587 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
BRCA2P51587 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
BRCA2P51587 MIR27B-201ENST00000385129 97 ntBASIC2.94□□□□□ -1.94
BRCA2P51587 RPS29P6-201ENST00000438196 145 ntBASIC2.94□□□□□ -1.94
BRCA2P51587 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC2.94□□□□□ -1.94
BRCA2P51587 CKS1BP1-201ENST00000555221 240 ntBASIC2.94□□□□□ -1.94
BRCA2P51587 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.94□□□□□ -1.94
BRCA2P51587 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
BRCA2P51587 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
BRCA2P51587 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
BRCA2P51587 RNU6-1159P-201ENST00000362933 107 ntBASIC2.93□□□□□ -1.94
BRCA2P51587 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
BRCA2P51587 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.93□□□□□ -1.94
BRCA2P51587 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.93□□□□□ -1.94
BRCA2P51587 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.93□□□□□ -1.94
BRCA2P51587 AC138627.1-204ENST00000641894 765 ntBASIC2.93□□□□□ -1.94
BRCA2P51587 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
BRCA2P51587 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
BRCA2P51587 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.93□□□□□ -1.94
BRCA2P51587 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
BRCA2P51587 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.93□□□□□ -1.94
BRCA2P51587 GLRXP1-201ENST00000423261 334 ntBASIC2.93□□□□□ -1.94
BRCA2P51587 SYT14P1-201ENST00000481459 721 ntBASIC2.93□□□□□ -1.94
BRCA2P51587 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.93□□□□□ -1.94
BRCA2P51587 HNRNPKP5-201ENST00000515300 253 ntBASIC2.93□□□□□ -1.94
BRCA2P51587 AC009318.2-201ENST00000610917 651 ntBASIC2.93□□□□□ -1.94
BRCA2P51587 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC2.93□□□□□ -1.94
BRCA2P51587 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC2.93□□□□□ -1.94
BRCA2P51587 TCP1P3-201ENST00000414406 1498 ntBASIC2.93□□□□□ -1.94
BRCA2P51587 AL079305.1-201ENST00000623159 3008 ntBASIC2.93□□□□□ -1.94
BRCA2P51587 AC012020.1-201ENST00000624541 1728 ntBASIC2.93□□□□□ -1.94
BRCA2P51587 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
BRCA2P51587 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
BRCA2P51587 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
BRCA2P51587 AL359511.1-201ENST00000402970 211 ntBASIC2.93□□□□□ -1.94
BRCA2P51587 DPH3P2-201ENST00000422618 250 ntBASIC2.93□□□□□ -1.94
BRCA2P51587 AC018634.1-201ENST00000437554 401 ntBASIC2.93□□□□□ -1.94
BRCA2P51587 AC010469.1-201ENST00000463864 576 ntBASIC2.93□□□□□ -1.94
BRCA2P51587 TRBV1-201ENST00000476502 284 ntBASIC2.93□□□□□ -1.94
BRCA2P51587 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
BRCA2P51587 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
BRCA2P51587 AL031595.2-201ENST00000624215 19071 ntBASIC2.92□□□□□ -1.94
BRCA2P51587 MIR26A1-201ENST00000362205 77 ntBASIC2.92□□□□□ -1.94
BRCA2P51587 RN7SKP58-201ENST00000411010 305 ntBASIC2.92□□□□□ -1.94
BRCA2P51587 FCF1P1-201ENST00000432690 571 ntBASIC2.92□□□□□ -1.94
BRCA2P51587 RPS12P2-201ENST00000439728 269 ntBASIC2.92□□□□□ -1.94
BRCA2P51587 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.92□□□□□ -1.94
BRCA2P51587 AC007424.1-203ENST00000554613 687 ntBASIC2.92□□□□□ -1.94
BRCA2P51587 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.92□□□□□ -1.94
BRCA2P51587 AC090695.1-201ENST00000561269 1222 ntBASIC2.92□□□□□ -1.94
BRCA2P51587 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BRCA2P51587 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
BRCA2P51587 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC2.92□□□□□ -1.94
BRCA2P51587 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BRCA2P51587 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
BRCA2P51587 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.92□□□□□ -1.94
BRCA2P51587 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
BRCA2P51587 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
BRCA2P51587 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
BRCA2P51587 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BRCA2P51587 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
BRCA2P51587 Z99127.2-201ENST00000441426 334 ntBASIC2.92□□□□□ -1.94
BRCA2P51587 HMGN1P5-201ENST00000448591 263 ntBASIC2.92□□□□□ -1.94
BRCA2P51587 AL590639.1-201ENST00000456484 337 ntBASIC2.92□□□□□ -1.94
BRCA2P51587 RN7SKP219-201ENST00000516825 296 ntBASIC2.92□□□□□ -1.94
BRCA2P51587 AC010198.2-201ENST00000550612 259 ntBASIC2.92□□□□□ -1.94
BRCA2P51587 AC010928.3-201ENST00000587712 541 ntBASIC2.92□□□□□ -1.94
BRCA2P51587 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.92□□□□□ -1.94
BRCA2P51587 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
BRCA2P51587 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
BRCA2P51587 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.91□□□□□ -1.94
BRCA2P51587 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.91□□□□□ -1.94
BRCA2P51587 AC015813.4-201ENST00000610469 179 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms