Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RNU1-20P-201ENST00000363314 162 ntBASIC4.12□□□□□ -1.75
SOX2P48431 RNU6-297P-201ENST00000384636 107 ntBASIC4.12□□□□□ -1.75
SOX2P48431 RNU1-82P-201ENST00000390851 165 ntBASIC4.12□□□□□ -1.75
SOX2P48431 Y_RNA.582-201ENST00000391023 95 ntBASIC4.12□□□□□ -1.75
SOX2P48431 HDGFP1-201ENST00000405943 252 ntBASIC4.12□□□□□ -1.75
SOX2P48431 RNU6-248P-201ENST00000410720 107 ntBASIC4.12□□□□□ -1.75
SOX2P48431 MTCO1P17-201ENST00000411522 491 ntBASIC4.12□□□□□ -1.75
SOX2P48431 HMGB3P23-201ENST00000414981 585 ntBASIC4.12□□□□□ -1.75
SOX2P48431 GJA6P-201ENST00000415117 1042 ntBASIC4.12□□□□□ -1.75
SOX2P48431 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.12□□□□□ -1.75
SOX2P48431 RAD23BP1-201ENST00000421404 1227 ntBASIC4.12□□□□□ -1.75
SOX2P48431 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.12□□□□□ -1.75
SOX2P48431 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.12□□□□□ -1.75
SOX2P48431 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.12□□□□□ -1.75
SOX2P48431 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.12□□□□□ -1.75
SOX2P48431 RPS3AP54-201ENST00000435535 734 ntBASIC4.12□□□□□ -1.75
SOX2P48431 AL022238.1-201ENST00000442557 355 ntBASIC4.12□□□□□ -1.75
SOX2P48431 HSPE1P28-201ENST00000443139 211 ntBASIC4.12□□□□□ -1.75
SOX2P48431 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.12□□□□□ -1.75
SOX2P48431 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.12□□□□□ -1.75
SOX2P48431 AC002381.1-201ENST00000447049 280 ntBASIC4.12□□□□□ -1.75
SOX2P48431 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.12□□□□□ -1.75
SOX2P48431 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.12□□□□□ -1.75
SOX2P48431 PABPC1P3-201ENST00000469174 459 ntBASIC4.12□□□□□ -1.75
SOX2P48431 AC104563.1-201ENST00000476147 376 ntBASIC4.12□□□□□ -1.75
SOX2P48431 TMED11P-201ENST00000479478 690 ntBASIC4.12□□□□□ -1.75
SOX2P48431 AC023424.2-201ENST00000493479 777 ntBASIC4.12□□□□□ -1.75
SOX2P48431 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.12□□□□□ -1.75
SOX2P48431 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.12□□□□□ -1.75
SOX2P48431 MTND4LP26-201ENST00000518144 282 ntBASIC4.12□□□□□ -1.75
SOX2P48431 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.12□□□□□ -1.75
SOX2P48431 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.12□□□□□ -1.75
SOX2P48431 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.12□□□□□ -1.75
SOX2P48431 OR5M7P-201ENST00000526140 972 ntBASIC4.12□□□□□ -1.75
SOX2P48431 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.12□□□□□ -1.75
SOX2P48431 AC092490.3-201ENST00000545370 572 ntBASIC4.12□□□□□ -1.75
SOX2P48431 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.12□□□□□ -1.75
SOX2P48431 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SOX2P48431 AC133555.2-201ENST00000550213 292 ntBASIC4.12□□□□□ -1.75
SOX2P48431 AC087883.1-201ENST00000551882 391 ntBASIC4.12□□□□□ -1.75
SOX2P48431 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.12□□□□□ -1.75
SOX2P48431 AC137800.2-201ENST00000574375 120 ntBASIC4.12□□□□□ -1.75
SOX2P48431 AC209154.1-201ENST00000582156 337 ntBASIC4.12□□□□□ -1.75
SOX2P48431 MIR4801-201ENST00000582704 82 ntBASIC4.12□□□□□ -1.75
SOX2P48431 AC011447.4-201ENST00000587562 111 ntBASIC4.12□□□□□ -1.75
SOX2P48431 TPMTP1-201ENST00000592307 737 ntBASIC4.12□□□□□ -1.75
SOX2P48431 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.12□□□□□ -1.75
SOX2P48431 AC103792.1-201ENST00000603591 919 ntBASIC4.12□□□□□ -1.75
SOX2P48431 RPL23AP92-201ENST00000603609 255 ntBASIC4.12□□□□□ -1.75
SOX2P48431 BCRP9-201ENST00000605312 388 ntBASIC4.12□□□□□ -1.75
SOX2P48431 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.12□□□□□ -1.75
SOX2P48431 AL445264.1-201ENST00000621719 171 ntBASIC4.12□□□□□ -1.75
SOX2P48431 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.12□□□□□ -1.75
SOX2P48431 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SOX2P48431 EOGT-210ENST00000615922 1931 ntBASIC4.12□□□□□ -1.75
SOX2P48431 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SOX2P48431 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SOX2P48431 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SOX2P48431 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SOX2P48431 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.12□□□□□ -1.75
SOX2P48431 AC114546.3-201ENST00000623582 1734 ntBASIC4.12□□□□□ -1.75
SOX2P48431 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SOX2P48431 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SOX2P48431 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SOX2P48431 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SOX2P48431 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.11□□□□□ -1.75
SOX2P48431 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SOX2P48431 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SOX2P48431 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SOX2P48431 MTCO2P5-201ENST00000422621 426 ntBASIC4.11□□□□□ -1.75
SOX2P48431 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.11□□□□□ -1.75
SOX2P48431 RPL7P36-201ENST00000444633 681 ntBASIC4.11□□□□□ -1.75
SOX2P48431 MTND1P1-201ENST00000445453 368 ntBASIC4.11□□□□□ -1.75
SOX2P48431 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.11□□□□□ -1.75
SOX2P48431 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
SOX2P48431 AL136126.1-201ENST00000473603 402 ntBASIC4.11□□□□□ -1.75
SOX2P48431 RN7SL817P-201ENST00000480777 288 ntBASIC4.11□□□□□ -1.75
SOX2P48431 RN7SL214P-201ENST00000487317 265 ntBASIC4.11□□□□□ -1.75
SOX2P48431 RPL7P51-201ENST00000490532 749 ntBASIC4.11□□□□□ -1.75
SOX2P48431 SNRPCP2-201ENST00000504370 475 ntBASIC4.11□□□□□ -1.75
SOX2P48431 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.11□□□□□ -1.75
SOX2P48431 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.11□□□□□ -1.75
SOX2P48431 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.11□□□□□ -1.75
SOX2P48431 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.11□□□□□ -1.75
SOX2P48431 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.11□□□□□ -1.75
SOX2P48431 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.11□□□□□ -1.75
SOX2P48431 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.11□□□□□ -1.75
SOX2P48431 AC004980.4-201ENST00000513375 203 ntBASIC4.11□□□□□ -1.75
SOX2P48431 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.11□□□□□ -1.75
SOX2P48431 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.11□□□□□ -1.75
SOX2P48431 IGKV2-18-201ENST00000522607 343 ntBASIC4.11□□□□□ -1.75
SOX2P48431 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.11□□□□□ -1.75
SOX2P48431 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.11□□□□□ -1.75
SOX2P48431 DYNLL1P4-201ENST00000549314 266 ntBASIC4.11□□□□□ -1.75
SOX2P48431 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.11□□□□□ -1.75
SOX2P48431 RN7SL52P-201ENST00000584271 284 ntBASIC4.11□□□□□ -1.75
SOX2P48431 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.11□□□□□ -1.75
SOX2P48431 AC093799.2-201ENST00000610062 578 ntBASIC4.11□□□□□ -1.75
SOX2P48431 AP001506.1-201ENST00000615444 211 ntBASIC4.11□□□□□ -1.75
SOX2P48431 AC095031.1-201ENST00000623685 672 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms