Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 HMGB1P38-201ENST00000490557 577 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 ARL4AP1-201ENST00000503220 705 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 DSTNP2-201ENST00000504533 515 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 AC011352.3-201ENST00000505162 593 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
TNFRSF4P43489 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 MTATP6P9-201ENST00000515039 680 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 RNA5SP208-201ENST00000516156 78 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 Vault.1-201ENST00000516474 102 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 SNORA70.24-201ENST00000517233 118 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 RNU4-60P-201ENST00000517239 135 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 AC103843.2-201ENST00000530523 682 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 ZNF971P-201ENST00000562068 1249 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 AC090330.1-201ENST00000588646 764 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 AC006116.10-201ENST00000591836 581 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 AL158050.2-201ENST00000605336 568 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 VN1R7P-201ENST00000619242 903 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 AC009269.6-201ENST00000621778 588 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TNFRSF4P43489 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 MTND5P31-201ENST00000419366 1374 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 AC111188.2-201ENST00000529697 1387 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TNFRSF4P43489 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TNFRSF4P43489 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 AC090337.1-201ENST00000579651 2074 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
TNFRSF4P43489 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TNFRSF4P43489 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 RNU6-441P-201ENST00000384545 106 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 RNVU1-14-201ENST00000384770 164 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 AC096533.1-201ENST00000411645 353 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 MTND4P22-201ENST00000413116 1169 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 RPL31P2-201ENST00000413849 377 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 AC097713.2-201ENST00000430199 356 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 RPS6P12-201ENST00000432491 726 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 ELOCP18-201ENST00000434209 337 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 AC010655.1-201ENST00000449336 292 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 AC109471.1-201ENST00000511631 612 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 AC104057.1-201ENST00000515547 497 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 snoZ278.1-201ENST00000517059 112 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 AC104417.1-201ENST00000523974 751 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TNFRSF4P43489 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 AP000238.1-201ENST00000608759 426 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TNFRSF4P43489 AC069209.1-201ENST00000619282 651 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
TNFRSF4P43489 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TNFRSF4P43489 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TNFRSF4P43489 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TNFRSF4P43489 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.72□□□□□ -1.81
TNFRSF4P43489 AC007823.1-201ENST00000569932 1566 ntBASIC3.72□□□□□ -1.81
TNFRSF4P43489 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
TNFRSF4P43489 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TNFRSF4P43489 PABPC1P7-201ENST00000413177 1513 ntBASIC3.71□□□□□ -1.82
TNFRSF4P43489 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
TNFRSF4P43489 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFRSF4P43489 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TNFRSF4P43489 MIR491-201ENST00000384877 84 ntBASIC3.71□□□□□ -1.82
TNFRSF4P43489 AL121978.1-201ENST00000402778 359 ntBASIC3.71□□□□□ -1.82
TNFRSF4P43489 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFRSF4P43489 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.71□□□□□ -1.82
TNFRSF4P43489 BX842559.1-201ENST00000419615 532 ntBASIC3.71□□□□□ -1.82
TNFRSF4P43489 AC009237.2-201ENST00000421358 284 ntBASIC3.71□□□□□ -1.82
TNFRSF4P43489 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.71□□□□□ -1.82
TNFRSF4P43489 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFRSF4P43489 ATP5HP2-201ENST00000433885 485 ntBASIC3.71□□□□□ -1.82
TNFRSF4P43489 B3GNT2P1-201ENST00000434960 952 ntBASIC3.71□□□□□ -1.82
TNFRSF4P43489 PPIAP17-201ENST00000438507 471 ntBASIC3.71□□□□□ -1.82
TNFRSF4P43489 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.71□□□□□ -1.82
TNFRSF4P43489 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TNFRSF4P43489 RBMY2UP-201ENST00000453474 324 ntBASIC3.71□□□□□ -1.82
TNFRSF4P43489 AC244505.3-201ENST00000454598 187 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms