Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 PPP1R11P1-201ENST00000486095 376 ntBASIC2.97□□□□□ -1.93
HTTP42858 OR5AK3P-201ENST00000527486 1297 ntBASIC2.97□□□□□ -1.93
HTTP42858 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.97□□□□□ -1.93
HTTP42858 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.97□□□□□ -1.93
HTTP42858 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HTTP42858 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HTTP42858 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
HTTP42858 AC006971.1-201ENST00000407916 4486 ntBASIC2.96□□□□□ -1.93
HTTP42858 OR2AS1P-201ENST00000427827 319 ntBASIC2.96□□□□□ -1.94
HTTP42858 RPS29P6-201ENST00000438196 145 ntBASIC2.96□□□□□ -1.94
HTTP42858 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC2.96□□□□□ -1.94
HTTP42858 SNORA31.1-201ENST00000515993 133 ntBASIC2.96□□□□□ -1.94
HTTP42858 SNORA31.5-201ENST00000516190 133 ntBASIC2.96□□□□□ -1.94
HTTP42858 AC233702.9-201ENST00000581528 203 ntBASIC2.96□□□□□ -1.94
HTTP42858 AC004696.1-201ENST00000614345 607 ntBASIC2.96□□□□□ -1.94
HTTP42858 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HTTP42858 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
HTTP42858 AC017007.4-201ENST00000503353 1352 ntBASIC2.96□□□□□ -1.94
HTTP42858 Y_RNA.269-201ENST00000364685 89 ntBASIC2.96□□□□□ -1.94
HTTP42858 Y_RNA.355-201ENST00000365462 98 ntBASIC2.96□□□□□ -1.94
HTTP42858 PTP4A1P5-201ENST00000420305 455 ntBASIC2.96□□□□□ -1.94
HTTP42858 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC2.96□□□□□ -1.94
HTTP42858 AC022795.1-201ENST00000473808 480 ntBASIC2.96□□□□□ -1.94
HTTP42858 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.96□□□□□ -1.94
HTTP42858 MIR4498-201ENST00000577599 66 ntBASIC2.96□□□□□ -1.94
HTTP42858 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
HTTP42858 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
HTTP42858 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.96□□□□□ -1.94
HTTP42858 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
HTTP42858 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC2.96□□□□□ -1.94
HTTP42858 MIR181A2-201ENST00000384863 110 ntBASIC2.95□□□□□ -1.94
HTTP42858 AC096638.1-201ENST00000444678 216 ntBASIC2.95□□□□□ -1.94
HTTP42858 CYCSP20-201ENST00000473154 315 ntBASIC2.95□□□□□ -1.94
HTTP42858 AC234781.5-201ENST00000508429 271 ntBASIC2.95□□□□□ -1.94
HTTP42858 MYL12AP1-201ENST00000518490 515 ntBASIC2.95□□□□□ -1.94
HTTP42858 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HTTP42858 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.95□□□□□ -1.94
HTTP42858 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.95□□□□□ -1.94
HTTP42858 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HTTP42858 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HTTP42858 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HTTP42858 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HTTP42858 RNA5SP213-201ENST00000391031 106 ntBASIC2.95□□□□□ -1.94
HTTP42858 FCF1P1-201ENST00000432690 571 ntBASIC2.95□□□□□ -1.94
HTTP42858 RPL9P6-201ENST00000492764 598 ntBASIC2.95□□□□□ -1.94
HTTP42858 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.95□□□□□ -1.94
HTTP42858 AC006484.1-201ENST00000435086 1884 ntBASIC2.95□□□□□ -1.94
HTTP42858 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.95□□□□□ -1.94
HTTP42858 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
HTTP42858 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
HTTP42858 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HTTP42858 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HTTP42858 SNORD114-1-201ENST00000362705 72 ntBASIC2.95□□□□□ -1.94
HTTP42858 Y_RNA.595-201ENST00000410403 105 ntBASIC2.95□□□□□ -1.94
HTTP42858 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC2.95□□□□□ -1.94
HTTP42858 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.95□□□□□ -1.94
HTTP42858 AP001317.1-201ENST00000531194 960 ntBASIC2.95□□□□□ -1.94
HTTP42858 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.95□□□□□ -1.94
HTTP42858 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.95□□□□□ -1.94
HTTP42858 ZNF72P-201ENST00000425869 1908 ntBASIC2.95□□□□□ -1.94
HTTP42858 NSRP1P1-201ENST00000444067 1693 ntBASIC2.94□□□□□ -1.94
HTTP42858 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HTTP42858 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC2.94□□□□□ -1.94
HTTP42858 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
HTTP42858 MIR30E-201ENST00000362104 92 ntBASIC2.94□□□□□ -1.94
HTTP42858 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HTTP42858 Z99127.2-201ENST00000441426 334 ntBASIC2.94□□□□□ -1.94
HTTP42858 AP000926.3-201ENST00000497201 299 ntBASIC2.94□□□□□ -1.94
HTTP42858 RN7SL636P-201ENST00000497504 294 ntBASIC2.94□□□□□ -1.94
HTTP42858 AC007424.1-203ENST00000554613 687 ntBASIC2.94□□□□□ -1.94
HTTP42858 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.94□□□□□ -1.94
HTTP42858 AL596275.2-204ENST00000641628 552 ntBASIC2.94□□□□□ -1.94
HTTP42858 AL596275.2-206ENST00000641957 626 ntBASIC2.94□□□□□ -1.94
HTTP42858 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HTTP42858 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HTTP42858 ELL2P4-201ENST00000446870 1376 ntBASIC2.94□□□□□ -1.94
HTTP42858 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.94□□□□□ -1.94
HTTP42858 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
HTTP42858 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC2.94□□□□□ -1.94
HTTP42858 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.94□□□□□ -1.94
HTTP42858 AC113430.1-201ENST00000506872 718 ntBASIC2.94□□□□□ -1.94
HTTP42858 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HTTP42858 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.94□□□□□ -1.94
HTTP42858 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HTTP42858 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HTTP42858 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
HTTP42858 KPNA2P2-201ENST00000419546 1489 ntBASIC2.93□□□□□ -1.94
HTTP42858 MTND5P6-201ENST00000422338 1798 ntBASIC2.93□□□□□ -1.94
HTTP42858 SNORA80E-201ENST00000384744 137 ntBASIC2.93□□□□□ -1.94
HTTP42858 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HTTP42858 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HTTP42858 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.93□□□□□ -1.94
HTTP42858 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.93□□□□□ -1.94
HTTP42858 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.93□□□□□ -1.94
HTTP42858 AC010928.3-201ENST00000587712 541 ntBASIC2.93□□□□□ -1.94
HTTP42858 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HTTP42858 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC2.93□□□□□ -1.94
HTTP42858 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
HTTP42858 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC2.93□□□□□ -1.94
HTTP42858 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms