Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFSF9P41273 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TNFSF9P41273 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.47□□□□□ -1.85
TNFSF9P41273 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.47□□□□□ -1.85
TNFSF9P41273 MIR5004-201ENST00000579078 107 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFSF9P41273 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.47□□□□□ -1.85
TNFSF9P41273 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.47□□□□□ -1.85
TNFSF9P41273 AC125494.3-201ENST00000602759 455 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 AL365503.1-201ENST00000605247 905 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 RMST_8.1-201ENST00000610287 165 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 AC016911.1-201ENST00000613297 452 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 uc_338.25-201ENST00000613756 156 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.47□□□□□ -1.85
TNFSF9P41273 AC007496.3-201ENST00000624987 3443 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TNFSF9P41273 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.47□□□□□ -1.85
TNFSF9P41273 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
TNFSF9P41273 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.46□□□□□ -1.86
TNFSF9P41273 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.46□□□□□ -1.86
TNFSF9P41273 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
TNFSF9P41273 RNA5SP167-201ENST00000365461 116 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 SNORA70E-201ENST00000384492 135 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 DNAJC19P6-201ENST00000401853 280 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 SNORA11C-201ENST00000408532 129 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 RNU4-47P-201ENST00000410876 114 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 AC096664.2-201ENST00000411843 406 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 LIPT1P1-201ENST00000415870 1186 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 AL353678.1-201ENST00000422735 741 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.46□□□□□ -1.86
TNFSF9P41273 BX890604.2-201ENST00000427883 474 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 AL512649.1-201ENST00000428997 581 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.46□□□□□ -1.86
TNFSF9P41273 AC127537.2-201ENST00000439258 465 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.46□□□□□ -1.86
TNFSF9P41273 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.46□□□□□ -1.86
TNFSF9P41273 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.46□□□□□ -1.86
TNFSF9P41273 AC087385.1-201ENST00000475062 312 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 AC006445.1-201ENST00000491925 405 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.46□□□□□ -1.86
TNFSF9P41273 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.46□□□□□ -1.86
TNFSF9P41273 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.46□□□□□ -1.86
TNFSF9P41273 PTGES3P3-201ENST00000511479 482 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 FABP5P12-201ENST00000515543 389 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 RNU6-751P-201ENST00000516382 101 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 RN7SKP283-201ENST00000517197 270 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 AC006518.1-201ENST00000541449 943 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.46□□□□□ -1.86
TNFSF9P41273 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.46□□□□□ -1.86
TNFSF9P41273 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.46□□□□□ -1.86
TNFSF9P41273 UBL5P2-201ENST00000583788 219 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 AC018618.2-201ENST00000604770 446 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 AC015849.2-201ENST00000605738 409 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 BX322635.1-201ENST00000605804 496 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.46□□□□□ -1.86
TNFSF9P41273 MIR6864-201ENST00000617935 70 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.46□□□□□ -1.86
TNFSF9P41273 AC018692.3-201ENST00000623929 123 ntBASIC3.46□□□□□ -1.86
TNFSF9P41273 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.46□□□□□ -1.86
TNFSF9P41273 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TNFSF9P41273 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TNFSF9P41273 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.46□□□□□ -1.86
TNFSF9P41273 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TNFSF9P41273 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.46□□□□□ -1.86
TNFSF9P41273 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.45□□□□□ -1.86
TNFSF9P41273 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TNFSF9P41273 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TNFSF9P41273 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TNFSF9P41273 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TNFSF9P41273 RNU6-356P-201ENST00000384140 107 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 MIR634-201ENST00000385208 97 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 Z98941.1-201ENST00000407764 100 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 RNA5SP31-201ENST00000411144 127 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFSF9P41273 VTA1P1-201ENST00000414044 866 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 RPS15AP40-201ENST00000419621 391 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFSF9P41273 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TNFSF9P41273 XKRY2-201ENST00000442362 1093 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 Z99127.3-201ENST00000448158 395 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFSF9P41273 HMGN1P18-201ENST00000457642 277 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 AL035404.1-201ENST00000497982 568 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 SNX5P1-201ENST00000505757 1041 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.45□□□□□ -1.86
TNFSF9P41273 AC008562.1-201ENST00000521763 330 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.45□□□□□ -1.86
TNFSF9P41273 AC092851.1-201ENST00000535964 478 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 AC008507.1-201ENST00000587506 734 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 AC025946.2-201ENST00000603398 234 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 PRELID3BP8-201ENST00000604148 295 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 Z82195.1-201ENST00000604558 398 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFSF9P41273 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TNFSF9P41273 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.45□□□□□ -1.86
TNFSF9P41273 AC004943.3-201ENST00000624116 600 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 AC104820.1-201ENST00000624183 307 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 AC091903.1-201ENST00000624322 454 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 AC138649.5-201ENST00000637456 137 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms