Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VARSP26640 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VARSP26640 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.36□□□□□ -1.39
VARSP26640 MFSD8-219ENST00000641228 2559 ntBASIC6.36□□□□□ -1.39
VARSP26640 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.36□□□□□ -1.39
VARSP26640 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VARSP26640 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
VARSP26640 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VARSP26640 AC062022.1-201ENST00000451026 1684 ntBASIC6.36□□□□□ -1.39
VARSP26640 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
VARSP26640 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
VARSP26640 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VARSP26640 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.36□□□□□ -1.39
VARSP26640 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
VARSP26640 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.35□□□□□ -1.39
VARSP26640 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.35□□□□□ -1.39
VARSP26640 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
VARSP26640 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
VARSP26640 RN7SKP237-201ENST00000364663 301 ntBASIC6.35□□□□□ -1.39
VARSP26640 Y_RNA.276-201ENST00000364732 109 ntBASIC6.35□□□□□ -1.39
VARSP26640 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.35□□□□□ -1.39
VARSP26640 Y_RNA.462-201ENST00000384268 102 ntBASIC6.35□□□□□ -1.39
VARSP26640 AC096664.2-201ENST00000411843 406 ntBASIC6.35□□□□□ -1.39
VARSP26640 AC011933.1-201ENST00000413334 321 ntBASIC6.35□□□□□ -1.39
VARSP26640 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.35□□□□□ -1.39
VARSP26640 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 AL645939.3-201ENST00000435408 225 ntBASIC6.35□□□□□ -1.39
VARSP26640 RPL36AP6-201ENST00000435770 321 ntBASIC6.35□□□□□ -1.39
VARSP26640 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 AC234771.2-201ENST00000445718 597 ntBASIC6.35□□□□□ -1.39
VARSP26640 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.35□□□□□ -1.39
VARSP26640 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.35□□□□□ -1.39
VARSP26640 IL7-206ENST00000520269 456 ntTSL 3 BASIC6.35□□□□□ -1.39
VARSP26640 AC040926.1-201ENST00000530195 238 ntBASIC6.35□□□□□ -1.39
VARSP26640 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.35□□□□□ -1.39
VARSP26640 AC026826.3-201ENST00000561747 158 ntBASIC6.35□□□□□ -1.39
VARSP26640 RPL29P33-201ENST00000587474 316 ntBASIC6.35□□□□□ -1.39
VARSP26640 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.35□□□□□ -1.39
VARSP26640 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.35□□□□□ -1.39
VARSP26640 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC6.35□□□□□ -1.39
VARSP26640 AC023813.4-201ENST00000607580 580 ntBASIC6.35□□□□□ -1.39
VARSP26640 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.35□□□□□ -1.39
VARSP26640 TCL6_3.1-201ENST00000619064 137 ntBASIC6.35□□□□□ -1.39
VARSP26640 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.35□□□□□ -1.39
VARSP26640 AL136313.1-201ENST00000624804 202 ntBASIC6.35□□□□□ -1.39
VARSP26640 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC6.35□□□□□ -1.39
VARSP26640 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
VARSP26640 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.35□□□□□ -1.39
VARSP26640 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.35□□□□□ -1.39
VARSP26640 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VARSP26640 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.35□□□□□ -1.39
VARSP26640 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VARSP26640 AP005432.1-201ENST00000580891 3485 ntBASIC6.34□□□□□ -1.39
VARSP26640 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.34□□□□□ -1.39
VARSP26640 AC010624.4-201ENST00000597606 1351 ntBASIC6.34□□□□□ -1.39
VARSP26640 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
VARSP26640 GTF2IP4-201ENST00000453092 2054 ntBASIC6.34□□□□□ -1.39
VARSP26640 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VARSP26640 PPIAP24-201ENST00000328558 471 ntBASIC6.34□□□□□ -1.39
VARSP26640 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
VARSP26640 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.34□□□□□ -1.39
VARSP26640 RNU1-65P-201ENST00000363919 148 ntBASIC6.34□□□□□ -1.39
VARSP26640 RNA5SP140-201ENST00000364524 92 ntBASIC6.34□□□□□ -1.39
VARSP26640 RNU6-806P-201ENST00000365147 105 ntBASIC6.34□□□□□ -1.39
VARSP26640 SNORA64.3-201ENST00000365647 134 ntBASIC6.34□□□□□ -1.39
VARSP26640 RNU6-95P-201ENST00000384697 107 ntBASIC6.34□□□□□ -1.39
VARSP26640 SNORA7A-201ENST00000384765 139 ntBASIC6.34□□□□□ -1.39
VARSP26640 AP003170.5-201ENST00000397185 335 ntBASIC6.34□□□□□ -1.39
VARSP26640 AL023284.3-201ENST00000407767 334 ntBASIC6.34□□□□□ -1.39
VARSP26640 GSTM3P2-201ENST00000412746 530 ntBASIC6.34□□□□□ -1.39
VARSP26640 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.34□□□□□ -1.39
VARSP26640 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.34□□□□□ -1.39
VARSP26640 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC6.34□□□□□ -1.39
VARSP26640 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.34□□□□□ -1.39
VARSP26640 RPS7P3-201ENST00000443360 580 ntBASIC6.34□□□□□ -1.39
VARSP26640 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.34□□□□□ -1.39
VARSP26640 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VARSP26640 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VARSP26640 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.34□□□□□ -1.39
VARSP26640 AC012123.2-201ENST00000485809 248 ntBASIC6.34□□□□□ -1.39
VARSP26640 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC6.34□□□□□ -1.39
VARSP26640 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.34□□□□□ -1.39
VARSP26640 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.34□□□□□ -1.39
VARSP26640 RNU6-1069P-201ENST00000516612 133 ntBASIC6.34□□□□□ -1.39
VARSP26640 AC022868.1-201ENST00000517767 391 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms