Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TMED11P-201ENST00000479478 690 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.75□□□□□ -1.97
COL8A2P25067 AC023050.1-201ENST00000498198 304 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 AC020893.1-201ENST00000502452 580 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.75□□□□□ -1.97
COL8A2P25067 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.75□□□□□ -1.97
COL8A2P25067 AC016550.3-201ENST00000515706 767 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 RNU6-889P-201ENST00000517189 103 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.75□□□□□ -1.97
COL8A2P25067 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.75□□□□□ -1.97
COL8A2P25067 HIGD1AP10-201ENST00000527837 282 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
COL8A2P25067 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.75□□□□□ -1.97
COL8A2P25067 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.75□□□□□ -1.97
COL8A2P25067 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.75□□□□□ -1.97
COL8A2P25067 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.75□□□□□ -1.97
COL8A2P25067 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.75□□□□□ -1.97
COL8A2P25067 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.75□□□□□ -1.97
COL8A2P25067 AP004372.1-201ENST00000604842 844 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 AL160281.1-201ENST00000605307 311 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 AC073657.2-201ENST00000605661 303 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.75□□□□□ -1.97
COL8A2P25067 AC110801.1-201ENST00000623590 212 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 AC026422.1-201ENST00000623961 452 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 AL356094.1-201ENST00000624663 1212 ntBASIC2.75□□□□□ -1.97
COL8A2P25067 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
COL8A2P25067 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL8A2P25067 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL8A2P25067 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL8A2P25067 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL8A2P25067 ZNF826P-207ENST00000622273 1910 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.74□□□□□ -1.97
COL8A2P25067 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL8A2P25067 RAD1P1-201ENST00000231383 813 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
COL8A2P25067 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL8A2P25067 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 RPL17P50-201ENST00000396131 546 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 RNU4-47P-201ENST00000410876 114 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 USP9YP19-201ENST00000412165 485 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 AC007390.1-201ENST00000415722 356 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.74□□□□□ -1.97
COL8A2P25067 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.74□□□□□ -1.97
COL8A2P25067 AL513174.1-201ENST00000423182 629 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 AC091390.3-201ENST00000426478 338 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.74□□□□□ -1.97
COL8A2P25067 MTND4P15-201ENST00000437913 1033 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 AL691517.1-201ENST00000440833 1235 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 AC023512.1-201ENST00000444513 499 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 AL671855.1-201ENST00000446875 1203 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.74□□□□□ -1.97
COL8A2P25067 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.74□□□□□ -1.97
COL8A2P25067 AC010468.1-201ENST00000461022 817 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 RPL6P9-201ENST00000466502 859 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 RN7SL442P-201ENST00000473804 320 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.74□□□□□ -1.97
COL8A2P25067 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.74□□□□□ -1.97
COL8A2P25067 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.74□□□□□ -1.97
COL8A2P25067 OR8K2P-201ENST00000524645 927 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.74□□□□□ -1.97
COL8A2P25067 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.74□□□□□ -1.97
COL8A2P25067 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.74□□□□□ -1.97
COL8A2P25067 LINC00557-201ENST00000563184 1279 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.74□□□□□ -1.97
COL8A2P25067 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.74□□□□□ -1.97
COL8A2P25067 MIR5004-201ENST00000579078 107 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 MIR548Y-201ENST00000582739 110 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 NF1P5-201ENST00000588287 448 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 AC040174.2-201ENST00000602701 465 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.74□□□□□ -1.97
COL8A2P25067 OR2BH1P-201ENST00000608850 864 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 AC011472.4-201ENST00000615848 491 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 AC020923.1-201ENST00000624021 917 ntBASIC2.74□□□□□ -1.97
COL8A2P25067 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.74□□□□□ -1.97
COL8A2P25067 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.74□□□□□ -1.97
COL8A2P25067 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL8A2P25067 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
COL8A2P25067 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL8A2P25067 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL8A2P25067 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.74□□□□□ -1.97
COL8A2P25067 AL353743.4-201ENST00000422653 1547 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.73□□□□□ -1.97
COL8A2P25067 PWAR6-201ENST00000552334 4618 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 ZNF833P-201ENST00000424938 1494 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 AL021368.2-201ENST00000606125 5352 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 RNU6-317P-201ENST00000384031 107 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 Z92545.1-201ENST00000411782 234 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 AC105402.1-201ENST00000413336 545 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.73□□□□□ -1.97
COL8A2P25067 AC019070.1-201ENST00000415008 1024 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 AIMP1P1-201ENST00000418670 937 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.73□□□□□ -1.97
COL8A2P25067 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.73□□□□□ -1.97
COL8A2P25067 AC017099.1-201ENST00000448261 1028 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.73□□□□□ -1.97
COL8A2P25067 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.73□□□□□ -1.97
COL8A2P25067 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.73□□□□□ -1.97
COL8A2P25067 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
COL8A2P25067 AC087312.1-201ENST00000471411 480 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 RPS29P2-201ENST00000479278 136 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms