Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 RPL7L1P13-201ENST00000511702 739 ntBASIC2.88□□□□□ -1.95
ATF1P18846 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.88□□□□□ -1.95
ATF1P18846 IGKV2D-19-201ENST00000523346 262 ntBASIC2.88□□□□□ -1.95
ATF1P18846 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.88□□□□□ -1.95
ATF1P18846 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.88□□□□□ -1.95
ATF1P18846 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.88□□□□□ -1.95
ATF1P18846 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.88□□□□□ -1.95
ATF1P18846 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.88□□□□□ -1.95
ATF1P18846 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.88□□□□□ -1.95
ATF1P18846 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.88□□□□□ -1.95
ATF1P18846 AC015802.5-201ENST00000607478 399 ntBASIC2.88□□□□□ -1.95
ATF1P18846 AL121772.2-201ENST00000614331 297 ntBASIC2.88□□□□□ -1.95
ATF1P18846 AC009032.1-201ENST00000617574 431 ntBASIC2.88□□□□□ -1.95
ATF1P18846 AL356321.1-201ENST00000621360 228 ntBASIC2.88□□□□□ -1.95
ATF1P18846 AC009093.8-201ENST00000641769 292 ntBASIC2.88□□□□□ -1.95
ATF1P18846 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATF1P18846 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATF1P18846 AL356274.2-201ENST00000624379 3752 ntBASIC2.88□□□□□ -1.95
ATF1P18846 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATF1P18846 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.88□□□□□ -1.95
ATF1P18846 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATF1P18846 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ATF1P18846 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.87□□□□□ -1.95
ATF1P18846 ZNF285B-201ENST00000561698 1767 ntBASIC2.87□□□□□ -1.95
ATF1P18846 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.87□□□□□ -1.95
ATF1P18846 AL161912.2-201ENST00000565707 3007 ntBASIC2.87□□□□□ -1.95
ATF1P18846 RNU1-70P-201ENST00000362618 164 ntBASIC2.87□□□□□ -1.95
ATF1P18846 RNU6-629P-201ENST00000384061 103 ntBASIC2.87□□□□□ -1.95
ATF1P18846 RPL23AP47-201ENST00000408017 460 ntBASIC2.87□□□□□ -1.95
ATF1P18846 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.87□□□□□ -1.95
ATF1P18846 RPL31P2-201ENST00000413849 377 ntBASIC2.87□□□□□ -1.95
ATF1P18846 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.87□□□□□ -1.95
ATF1P18846 AC012498.1-201ENST00000424037 437 ntBASIC2.87□□□□□ -1.95
ATF1P18846 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.87□□□□□ -1.95
ATF1P18846 AL035246.1-201ENST00000433554 1255 ntBASIC2.87□□□□□ -1.95
ATF1P18846 VDAC1P3-201ENST00000434069 851 ntBASIC2.87□□□□□ -1.95
ATF1P18846 AC073063.1-201ENST00000434352 607 ntBASIC2.87□□□□□ -1.95
ATF1P18846 RPL6P5-201ENST00000445678 828 ntBASIC2.87□□□□□ -1.95
ATF1P18846 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.87□□□□□ -1.95
ATF1P18846 RBMY2UP-201ENST00000453474 324 ntBASIC2.87□□□□□ -1.95
ATF1P18846 MRPL35P4-201ENST00000453682 566 ntBASIC2.87□□□□□ -1.95
ATF1P18846 ST13P14-201ENST00000474095 734 ntBASIC2.87□□□□□ -1.95
ATF1P18846 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.87□□□□□ -1.95
ATF1P18846 AC106707.2-201ENST00000484182 374 ntBASIC2.87□□□□□ -1.95
ATF1P18846 RN7SL283P-201ENST00000489055 303 ntBASIC2.87□□□□□ -1.95
ATF1P18846 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ATF1P18846 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.87□□□□□ -1.95
ATF1P18846 RNU6-760P-201ENST00000516078 97 ntBASIC2.87□□□□□ -1.95
ATF1P18846 RN7SKP96-201ENST00000516948 297 ntBASIC2.87□□□□□ -1.95
ATF1P18846 IGKV2-26-201ENST00000518305 343 ntBASIC2.87□□□□□ -1.95
ATF1P18846 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.87□□□□□ -1.95
ATF1P18846 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
ATF1P18846 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.87□□□□□ -1.95
ATF1P18846 AC084824.1-201ENST00000550917 1005 ntBASIC2.87□□□□□ -1.95
ATF1P18846 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.87□□□□□ -1.95
ATF1P18846 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.87□□□□□ -1.95
ATF1P18846 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.87□□□□□ -1.95
ATF1P18846 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.87□□□□□ -1.95
ATF1P18846 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.87□□□□□ -1.95
ATF1P18846 AC112230.1-201ENST00000604342 547 ntBASIC2.87□□□□□ -1.95
ATF1P18846 uc_338.1-201ENST00000612113 180 ntBASIC2.87□□□□□ -1.95
ATF1P18846 AC068831.8-201ENST00000620171 435 ntBASIC2.87□□□□□ -1.95
ATF1P18846 AC020763.5-201ENST00000623298 430 ntBASIC2.87□□□□□ -1.95
ATF1P18846 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ATF1P18846 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATF1P18846 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATF1P18846 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ATF1P18846 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.87□□□□□ -1.95
ATF1P18846 AC007342.9-201ENST00000623877 1385 ntBASIC2.87□□□□□ -1.95
ATF1P18846 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.86□□□□□ -1.95
ATF1P18846 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
ATF1P18846 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
ATF1P18846 RNU4-35P-201ENST00000362588 141 ntBASIC2.86□□□□□ -1.95
ATF1P18846 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ATF1P18846 SNORA5A-201ENST00000384111 134 ntBASIC2.86□□□□□ -1.95
ATF1P18846 SNORA46-201ENST00000384762 135 ntBASIC2.86□□□□□ -1.95
ATF1P18846 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.86□□□□□ -1.95
ATF1P18846 CYCSP19-201ENST00000411715 316 ntBASIC2.86□□□□□ -1.95
ATF1P18846 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.86□□□□□ -1.95
ATF1P18846 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ATF1P18846 NDUFB4P5-201ENST00000415445 361 ntBASIC2.86□□□□□ -1.95
ATF1P18846 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.86□□□□□ -1.95
ATF1P18846 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.86□□□□□ -1.95
ATF1P18846 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.86□□□□□ -1.95
ATF1P18846 OR2AS1P-201ENST00000427827 319 ntBASIC2.86□□□□□ -1.95
ATF1P18846 EIF2S2P3-201ENST00000428356 999 ntBASIC2.86□□□□□ -1.95
ATF1P18846 AC091390.1-201ENST00000433904 331 ntBASIC2.86□□□□□ -1.95
ATF1P18846 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.86□□□□□ -1.95
ATF1P18846 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.86□□□□□ -1.95
ATF1P18846 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.86□□□□□ -1.95
ATF1P18846 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
ATF1P18846 APOOP4-201ENST00000513530 597 ntBASIC2.86□□□□□ -1.95
ATF1P18846 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.86□□□□□ -1.95
ATF1P18846 OR5AK3P-201ENST00000527486 1297 ntBASIC2.86□□□□□ -1.95
ATF1P18846 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.86□□□□□ -1.95
ATF1P18846 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.86□□□□□ -1.95
ATF1P18846 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.86□□□□□ -1.95
ATF1P18846 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.86□□□□□ -1.95
ATF1P18846 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
ATF1P18846 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms