Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.56□□□□□ -1.84
RETP07949 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.56□□□□□ -1.84
RETP07949 HAUS1P3-201ENST00000523909 662 ntBASIC3.56□□□□□ -1.84
RETP07949 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.56□□□□□ -1.84
RETP07949 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.56□□□□□ -1.84
RETP07949 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.56□□□□□ -1.84
RETP07949 UBE2NP1-201ENST00000545592 458 ntBASIC3.56□□□□□ -1.84
RETP07949 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RETP07949 AL121766.1-201ENST00000547436 487 ntBASIC3.56□□□□□ -1.84
RETP07949 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.56□□□□□ -1.84
RETP07949 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.56□□□□□ -1.84
RETP07949 MIR4738-201ENST00000579134 87 ntBASIC3.56□□□□□ -1.84
RETP07949 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.56□□□□□ -1.84
RETP07949 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.56□□□□□ -1.84
RETP07949 AL163642.2-201ENST00000604722 1019 ntBASIC3.56□□□□□ -1.84
RETP07949 AL021368.1-201ENST00000607490 540 ntBASIC3.56□□□□□ -1.84
RETP07949 AL355802.4-201ENST00000607635 548 ntBASIC3.56□□□□□ -1.84
RETP07949 AL162274.2-201ENST00000614406 332 ntBASIC3.56□□□□□ -1.84
RETP07949 AC079684.1-201ENST00000621405 437 ntBASIC3.56□□□□□ -1.84
RETP07949 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.56□□□□□ -1.84
RETP07949 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
RETP07949 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RETP07949 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.56□□□□□ -1.84
RETP07949 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.56□□□□□ -1.84
RETP07949 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RETP07949 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RETP07949 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
RETP07949 RIOK3P1-201ENST00000418778 1528 ntBASIC3.55□□□□□ -1.84
RETP07949 AC233263.6-201ENST00000631132 1963 ntBASIC3.55□□□□□ -1.84
RETP07949 AL589826.1-201ENST00000340697 249 ntBASIC3.55□□□□□ -1.84
RETP07949 AP000567.1-201ENST00000406413 156 ntBASIC3.55□□□□□ -1.84
RETP07949 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
RETP07949 AC091862.1-201ENST00000438016 1100 ntBASIC3.55□□□□□ -1.84
RETP07949 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.55□□□□□ -1.84
RETP07949 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
RETP07949 RPL12P26-201ENST00000452430 487 ntBASIC3.55□□□□□ -1.84
RETP07949 MTND2P3-201ENST00000452458 470 ntBASIC3.55□□□□□ -1.84
RETP07949 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.55□□□□□ -1.84
RETP07949 AC011825.1-201ENST00000484967 388 ntBASIC3.55□□□□□ -1.84
RETP07949 RN7SL504P-201ENST00000494496 287 ntBASIC3.55□□□□□ -1.84
RETP07949 AC093663.1-201ENST00000497190 394 ntBASIC3.55□□□□□ -1.84
RETP07949 AC010265.1-201ENST00000513509 211 ntBASIC3.55□□□□□ -1.84
RETP07949 RNA5SP208-201ENST00000516156 78 ntBASIC3.55□□□□□ -1.84
RETP07949 SNORA70.18-201ENST00000516696 98 ntBASIC3.55□□□□□ -1.84
RETP07949 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.55□□□□□ -1.84
RETP07949 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.55□□□□□ -1.84
RETP07949 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.55□□□□□ -1.84
RETP07949 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.55□□□□□ -1.84
RETP07949 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.55□□□□□ -1.84
RETP07949 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.55□□□□□ -1.84
RETP07949 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.55□□□□□ -1.84
RETP07949 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.55□□□□□ -1.84
RETP07949 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.55□□□□□ -1.84
RETP07949 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.55□□□□□ -1.84
RETP07949 CR589904.2-201ENST00000612533 440 ntBASIC3.55□□□□□ -1.84
RETP07949 AP004607.9-201ENST00000618202 316 ntBASIC3.55□□□□□ -1.84
RETP07949 AC015726.3-201ENST00000624501 418 ntBASIC3.55□□□□□ -1.84
RETP07949 AC116563.2-201ENST00000624751 535 ntBASIC3.55□□□□□ -1.84
RETP07949 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RETP07949 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RETP07949 AC007256.1-201ENST00000392253 2765 ntBASIC3.55□□□□□ -1.84
RETP07949 AC024341.1-201ENST00000526444 1552 ntBASIC3.55□□□□□ -1.84
RETP07949 ZNF33CP-201ENST00000432492 2030 ntBASIC3.54□□□□□ -1.84
RETP07949 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.54□□□□□ -1.84
RETP07949 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RETP07949 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RETP07949 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RETP07949 RNU6-301P-201ENST00000384277 107 ntBASIC3.54□□□□□ -1.84
RETP07949 RNU6-185P-201ENST00000384421 107 ntBASIC3.54□□□□□ -1.84
RETP07949 SNORD17-201ENST00000390930 237 ntBASIC3.54□□□□□ -1.84
RETP07949 ARF4P3-201ENST00000397387 509 ntBASIC3.54□□□□□ -1.84
RETP07949 Z86062.1-201ENST00000406773 777 ntBASIC3.54□□□□□ -1.84
RETP07949 RANP4-201ENST00000413361 655 ntBASIC3.54□□□□□ -1.84
RETP07949 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.54□□□□□ -1.84
RETP07949 AC006989.1-201ENST00000427212 131 ntBASIC3.54□□□□□ -1.84
RETP07949 TXNP1-201ENST00000441872 371 ntBASIC3.54□□□□□ -1.84
RETP07949 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.54□□□□□ -1.84
RETP07949 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.54□□□□□ -1.84
RETP07949 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.54□□□□□ -1.84
RETP07949 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.54□□□□□ -1.84
RETP07949 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.54□□□□□ -1.84
RETP07949 AL513343.1-201ENST00000451818 792 ntBASIC3.54□□□□□ -1.84
RETP07949 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.54□□□□□ -1.84
RETP07949 HMGB1P26-201ENST00000452520 628 ntBASIC3.54□□□□□ -1.84
RETP07949 NPM1P17-201ENST00000479221 602 ntBASIC3.54□□□□□ -1.84
RETP07949 RPL23AP44-201ENST00000482216 473 ntBASIC3.54□□□□□ -1.84
RETP07949 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.54□□□□□ -1.84
RETP07949 SNRPGP1-201ENST00000553864 222 ntBASIC3.54□□□□□ -1.84
RETP07949 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.54□□□□□ -1.84
RETP07949 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.54□□□□□ -1.84
RETP07949 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.54□□□□□ -1.84
RETP07949 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
RETP07949 MIR5004-201ENST00000579078 107 ntBASIC3.54□□□□□ -1.84
RETP07949 AP003117.1-201ENST00000602771 554 ntBASIC3.54□□□□□ -1.84
RETP07949 AC005156.1-201ENST00000613371 573 ntBASIC3.54□□□□□ -1.84
RETP07949 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.54□□□□□ -1.84
RETP07949 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.54□□□□□ -1.84
RETP07949 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
RETP07949 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.54□□□□□ -1.84
RETP07949 AC118273.1-201ENST00000525324 3006 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms