Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC024220.1-201ENST00000603675 484 ntBASIC3.49□□□□□ -1.85
CTDNEP1O95476 AC012467.1-201ENST00000607740 256 ntBASIC3.49□□□□□ -1.85
CTDNEP1O95476 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTDNEP1O95476 AL392048.1-201ENST00000613946 534 ntBASIC3.49□□□□□ -1.85
CTDNEP1O95476 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CTDNEP1O95476 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTDNEP1O95476 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.49□□□□□ -1.85
CTDNEP1O95476 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTDNEP1O95476 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTDNEP1O95476 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTDNEP1O95476 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTDNEP1O95476 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
CTDNEP1O95476 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CTDNEP1O95476 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.48□□□□□ -1.85
CTDNEP1O95476 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CTDNEP1O95476 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CTDNEP1O95476 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.48□□□□□ -1.85
CTDNEP1O95476 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
CTDNEP1O95476 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CTDNEP1O95476 AL589826.1-201ENST00000340697 249 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 RNU1-85P-201ENST00000364127 164 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 MIR23B-201ENST00000384832 97 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 AC013404.1-201ENST00000413068 249 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 AL445528.1-201ENST00000426330 420 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 UBE2V1P1-201ENST00000430836 445 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.48□□□□□ -1.85
CTDNEP1O95476 RPS29P6-201ENST00000438196 145 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.48□□□□□ -1.85
CTDNEP1O95476 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.48□□□□□ -1.85
CTDNEP1O95476 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.48□□□□□ -1.85
CTDNEP1O95476 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTDNEP1O95476 AL500527.1-201ENST00000448532 255 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 RNU7-170P-201ENST00000459303 61 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 AC089999.1-201ENST00000460336 374 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 RPL7P49-201ENST00000471402 708 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 RPS17P11-201ENST00000474297 293 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 RPS3AP43-201ENST00000479743 781 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 RN7SL633P-201ENST00000488974 297 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 PCNAP1-201ENST00000505363 709 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.48□□□□□ -1.85
CTDNEP1O95476 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTDNEP1O95476 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.48□□□□□ -1.85
CTDNEP1O95476 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.48□□□□□ -1.85
CTDNEP1O95476 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.48□□□□□ -1.85
CTDNEP1O95476 AC125494.3-201ENST00000602759 455 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 LINC00216-201ENST00000623548 1126 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 AC004777.1-201ENST00000624317 287 ntBASIC3.48□□□□□ -1.85
CTDNEP1O95476 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CTDNEP1O95476 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CTDNEP1O95476 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.48□□□□□ -1.85
CTDNEP1O95476 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.48□□□□□ -1.85
CTDNEP1O95476 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTDNEP1O95476 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.47□□□□□ -1.85
CTDNEP1O95476 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTDNEP1O95476 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTDNEP1O95476 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTDNEP1O95476 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.47□□□□□ -1.85
CTDNEP1O95476 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTDNEP1O95476 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.47□□□□□ -1.85
CTDNEP1O95476 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTDNEP1O95476 RNU6-666P-201ENST00000363499 107 ntBASIC3.47□□□□□ -1.85
CTDNEP1O95476 RNA5SP167-201ENST00000365461 116 ntBASIC3.47□□□□□ -1.85
CTDNEP1O95476 U3.19-201ENST00000390893 196 ntBASIC3.47□□□□□ -1.85
CTDNEP1O95476 U3.42-201ENST00000408746 214 ntBASIC3.47□□□□□ -1.85
CTDNEP1O95476 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.47□□□□□ -1.85
CTDNEP1O95476 DUTP6-201ENST00000425573 462 ntBASIC3.47□□□□□ -1.85
CTDNEP1O95476 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.47□□□□□ -1.85
CTDNEP1O95476 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.47□□□□□ -1.85
CTDNEP1O95476 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.47□□□□□ -1.85
CTDNEP1O95476 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.47□□□□□ -1.85
CTDNEP1O95476 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.47□□□□□ -1.85
CTDNEP1O95476 AC074029.2-201ENST00000551045 634 ntBASIC3.47□□□□□ -1.85
CTDNEP1O95476 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.47□□□□□ -1.85
CTDNEP1O95476 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.47□□□□□ -1.85
CTDNEP1O95476 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.47□□□□□ -1.85
CTDNEP1O95476 AP003072.4-201ENST00000624580 310 ntBASIC3.47□□□□□ -1.85
CTDNEP1O95476 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTDNEP1O95476 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTDNEP1O95476 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 MTND5P19-201ENST00000424872 1794 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 AL353743.4-201ENST00000422653 1547 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CTDNEP1O95476 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTDNEP1O95476 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 RNU6-328P-201ENST00000390887 106 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 RNA5SP274-201ENST00000410484 108 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 MTATP6P19-201ENST00000413797 659 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 BTF3P9-201ENST00000418784 283 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CTDNEP1O95476 FAM204CP-201ENST00000424489 642 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 MTCO1P52-201ENST00000433928 531 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 ARL5AP3-201ENST00000439327 386 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 VN1R48P-201ENST00000448149 1036 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 RPL23AP62-201ENST00000463396 453 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 RNU6-760P-201ENST00000516078 97 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms