Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNU6-150P-201ENST00000516237 95 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 HSPA8P13-201ENST00000523715 472 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VPS4BO75351 AC009643.1-201ENST00000532030 391 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
VPS4BO75351 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.69□□□□□ -1.66
VPS4BO75351 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS4BO75351 AC068944.2-201ENST00000610373 403 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 AC008498.1-201ENST00000613012 531 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 AC131238.1-201ENST00000617135 328 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS4BO75351 RNU6-156P-201ENST00000621869 107 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4BO75351 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS4BO75351 AC009229.4-201ENST00000623854 1947 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS4BO75351 SAGE4P-201ENST00000442271 3381 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4BO75351 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS4BO75351 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VPS4BO75351 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VPS4BO75351 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS4BO75351 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS4BO75351 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS4BO75351 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 RNU5E-5P-201ENST00000365379 116 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS4BO75351 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VPS4BO75351 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VPS4BO75351 AC025750.1-201ENST00000399891 379 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 MIR298-201ENST00000401212 88 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 MTCYBP36-201ENST00000404146 440 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 RNA5SP345-201ENST00000410646 108 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 RNU6-248P-201ENST00000410720 107 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4BO75351 RPL18P10-201ENST00000425606 538 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4BO75351 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4BO75351 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4BO75351 CEACAMP1-201ENST00000434624 1035 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS4BO75351 HMGB3P9-201ENST00000441799 583 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4BO75351 AC239367.2-201ENST00000447309 705 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4BO75351 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4BO75351 RNU7-136P-201ENST00000458819 69 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 IGLV2-34-201ENST00000490007 283 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 AC026979.1-201ENST00000492525 396 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 FTH1P24-201ENST00000503502 462 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.68□□□□□ -1.66
VPS4BO75351 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4BO75351 POU5F1P7-201ENST00000508759 541 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS4BO75351 RNA5SP43-201ENST00000516559 110 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 AF186190.1-201ENST00000517470 480 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 AC025881.1-201ENST00000518851 512 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS4BO75351 AP003392.2-201ENST00000527269 208 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 AP004247.1-201ENST00000531556 1289 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.68□□□□□ -1.66
VPS4BO75351 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS4BO75351 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS4BO75351 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS4BO75351 MIR4801-201ENST00000582704 82 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 AL133338.2-201ENST00000604292 736 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 COX6CP4-201ENST00000605798 228 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS4BO75351 AC010424.2-201ENST00000607594 443 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 AC140113.4-201ENST00000622087 222 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 AC015908.5-201ENST00000623289 343 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS4BO75351 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS4BO75351 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS4BO75351 AC093535.2-201ENST00000624769 2326 ntBASIC4.68□□□□□ -1.66
VPS4BO75351 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS4BO75351 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
VPS4BO75351 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS4BO75351 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
VPS4BO75351 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS4BO75351 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS4BO75351 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS4BO75351 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS4BO75351 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS4BO75351 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS4BO75351 SNORA51.6-201ENST00000384151 125 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 RNU6-1042P-201ENST00000384204 107 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 RPS3AP23-201ENST00000401762 784 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AL357515.1-201ENST00000402967 542 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AL078595.1-201ENST00000404458 226 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AL080315.1-201ENST00000406055 466 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 TBCAP2-201ENST00000416175 326 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS4BO75351 MTCYBP5-201ENST00000423752 1135 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS4BO75351 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS4BO75351 RPL36P19-201ENST00000430744 301 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AC109583.1-201ENST00000432156 268 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms