Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNSO60931 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.19□□□□□ -1.9
CTNSO60931 SRP72P2-201ENST00000344851 1979 ntBASIC3.18□□□□□ -1.9
CTNSO60931 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTNSO60931 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTNSO60931 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CTNSO60931 SNORD51.1-201ENST00000365405 77 ntBASIC3.18□□□□□ -1.9
CTNSO60931 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CTNSO60931 RNA5SP171-201ENST00000391071 115 ntBASIC3.18□□□□□ -1.9
CTNSO60931 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CTNSO60931 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.18□□□□□ -1.9
CTNSO60931 Z99755.1-201ENST00000414048 380 ntBASIC3.18□□□□□ -1.9
CTNSO60931 RPL31P12-201ENST00000422587 358 ntBASIC3.18□□□□□ -1.9
CTNSO60931 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNSO60931 YME1L1P1-201ENST00000429435 297 ntBASIC3.18□□□□□ -1.9
CTNSO60931 AC097713.2-201ENST00000430199 356 ntBASIC3.18□□□□□ -1.9
CTNSO60931 AC005019.1-201ENST00000436455 431 ntBASIC3.18□□□□□ -1.9
CTNSO60931 HMGB1P48-201ENST00000446155 598 ntBASIC3.18□□□□□ -1.9
CTNSO60931 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.18□□□□□ -1.9
CTNSO60931 PRDX3P3-201ENST00000447765 522 ntBASIC3.18□□□□□ -1.9
CTNSO60931 AL358232.1-201ENST00000448030 501 ntBASIC3.18□□□□□ -1.9
CTNSO60931 AC010401.1-201ENST00000463867 348 ntBASIC3.18□□□□□ -1.9
CTNSO60931 RPL6P9-201ENST00000466502 859 ntBASIC3.18□□□□□ -1.9
CTNSO60931 AC093663.1-201ENST00000497190 394 ntBASIC3.18□□□□□ -1.9
CTNSO60931 PTGES3P3-201ENST00000511479 482 ntBASIC3.18□□□□□ -1.9
CTNSO60931 AC107934.2-201ENST00000518653 310 ntBASIC3.18□□□□□ -1.9
CTNSO60931 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNSO60931 AP001636.2-201ENST00000525517 696 ntBASIC3.18□□□□□ -1.9
CTNSO60931 AC011611.1-201ENST00000552179 197 ntBASIC3.18□□□□□ -1.9
CTNSO60931 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNSO60931 NCAPGP2-201ENST00000557911 754 ntBASIC3.18□□□□□ -1.9
CTNSO60931 AC011492.1-201ENST00000600023 315 ntBASIC3.18□□□□□ -1.9
CTNSO60931 AL355802.4-201ENST00000607635 548 ntBASIC3.18□□□□□ -1.9
CTNSO60931 AL356321.1-201ENST00000621360 228 ntBASIC3.18□□□□□ -1.9
CTNSO60931 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNSO60931 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.18□□□□□ -1.9
CTNSO60931 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.18□□□□□ -1.9
CTNSO60931 U6.105-201ENST00000637379 88 ntBASIC3.18□□□□□ -1.9
CTNSO60931 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTNSO60931 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNSO60931 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTNSO60931 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
CTNSO60931 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTNSO60931 RNU1-33P-201ENST00000364249 162 ntBASIC3.17□□□□□ -1.9
CTNSO60931 AC126124.2-201ENST00000413542 321 ntBASIC3.17□□□□□ -1.9
CTNSO60931 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNSO60931 AC093578.1-201ENST00000415219 368 ntBASIC3.17□□□□□ -1.9
CTNSO60931 HSFY4P-201ENST00000415994 1181 ntBASIC3.17□□□□□ -1.9
CTNSO60931 RPS15AP40-201ENST00000419621 391 ntBASIC3.17□□□□□ -1.9
CTNSO60931 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTNSO60931 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNSO60931 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.17□□□□□ -1.9
CTNSO60931 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNSO60931 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNSO60931 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.17□□□□□ -1.9
CTNSO60931 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNSO60931 AC069540.1-201ENST00000446320 988 ntBASIC3.17□□□□□ -1.9
CTNSO60931 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTNSO60931 RPL21P10-201ENST00000463521 490 ntBASIC3.17□□□□□ -1.9
CTNSO60931 AC146507.1-201ENST00000468335 354 ntBASIC3.17□□□□□ -1.9
CTNSO60931 AC087312.1-201ENST00000471411 480 ntBASIC3.17□□□□□ -1.9
CTNSO60931 AC104689.1-201ENST00000473356 768 ntBASIC3.17□□□□□ -1.9
CTNSO60931 AC008494.2-201ENST00000514544 370 ntBASIC3.17□□□□□ -1.9
CTNSO60931 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.17□□□□□ -1.9
CTNSO60931 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.17□□□□□ -1.9
CTNSO60931 AC010198.2-201ENST00000550612 259 ntBASIC3.17□□□□□ -1.9
CTNSO60931 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNSO60931 AC053481.3-201ENST00000577881 843 ntBASIC3.17□□□□□ -1.9
CTNSO60931 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNSO60931 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.17□□□□□ -1.9
CTNSO60931 AC016877.3-201ENST00000606778 504 ntBASIC3.17□□□□□ -1.9
CTNSO60931 MIR7975-201ENST00000619350 68 ntBASIC3.17□□□□□ -1.9
CTNSO60931 AC018816.2-201ENST00000621460 353 ntBASIC3.17□□□□□ -1.9
CTNSO60931 AC090617.9-201ENST00000623751 147 ntBASIC3.17□□□□□ -1.9
CTNSO60931 AC127502.3-201ENST00000636170 1206 ntBASIC3.17□□□□□ -1.9
CTNSO60931 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.17□□□□□ -1.9
CTNSO60931 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTNSO60931 CR383658.2-201ENST00000547576 1525 ntBASIC3.17□□□□□ -1.9
CTNSO60931 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CTNSO60931 AL157700.1-201ENST00000561973 1432 ntBASIC3.17□□□□□ -1.9
CTNSO60931 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTNSO60931 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CTNSO60931 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTNSO60931 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTNSO60931 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTNSO60931 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTNSO60931 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CTNSO60931 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CTNSO60931 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CTNSO60931 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.16□□□□□ -1.9
CTNSO60931 AP002088.1-201ENST00000382740 395 ntBASIC3.16□□□□□ -1.9
CTNSO60931 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.16□□□□□ -1.9
CTNSO60931 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.16□□□□□ -1.9
CTNSO60931 OR1AA1P-201ENST00000419597 916 ntBASIC3.16□□□□□ -1.9
CTNSO60931 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.16□□□□□ -1.9
CTNSO60931 AL513174.1-201ENST00000423182 629 ntBASIC3.16□□□□□ -1.9
CTNSO60931 TRIAP1P1-201ENST00000427062 225 ntBASIC3.16□□□□□ -1.9
CTNSO60931 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.16□□□□□ -1.9
CTNSO60931 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.16□□□□□ -1.9
CTNSO60931 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms