Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.94□□□□□ -1.78
ZIC3O60481 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.94□□□□□ -1.78
ZIC3O60481 AC016065.2-201ENST00000514530 444 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.94□□□□□ -1.78
ZIC3O60481 AC060788.1-201ENST00000521318 469 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.94□□□□□ -1.78
ZIC3O60481 AC008127.2-201ENST00000549925 1075 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.94□□□□□ -1.78
ZIC3O60481 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.94□□□□□ -1.78
ZIC3O60481 AC011477.5-201ENST00000586571 259 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.94□□□□□ -1.78
ZIC3O60481 AL031775.1-201ENST00000607014 887 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.94□□□□□ -1.78
ZIC3O60481 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.94□□□□□ -1.78
ZIC3O60481 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.94□□□□□ -1.78
ZIC3O60481 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.94□□□□□ -1.78
ZIC3O60481 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.94□□□□□ -1.78
ZIC3O60481 AL356596.1-201ENST00000624230 379 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 AP000843.1-201ENST00000624880 701 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.94□□□□□ -1.78
ZIC3O60481 U6.101-201ENST00000637707 76 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
ZIC3O60481 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.94□□□□□ -1.78
ZIC3O60481 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZIC3O60481 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.94□□□□□ -1.78
ZIC3O60481 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZIC3O60481 AC139713.2-215ENST00000641428 5037 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 AC130650.2-201ENST00000618736 2403 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 AL158163.1-201ENST00000603915 1649 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZIC3O60481 OR10J6P-201ENST00000289731 930 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
ZIC3O60481 RNU6-623P-201ENST00000363143 105 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 RNA5SP175-201ENST00000364275 119 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 AC068538.1-201ENST00000376856 336 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ZIC3O60481 AC016769.3-201ENST00000396562 315 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 AL583835.1-201ENST00000399570 407 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 EIF5P1-201ENST00000400019 1231 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 VN1R8P-201ENST00000407739 893 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 AL358176.3-201ENST00000420757 454 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 COX6CP15-201ENST00000426313 211 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 RPS3AP54-201ENST00000435535 734 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.93□□□□□ -1.78
ZIC3O60481 AL512326.1-201ENST00000443050 721 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 RPL36AP33-201ENST00000450395 310 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZIC3O60481 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZIC3O60481 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.93□□□□□ -1.78
ZIC3O60481 AC068724.1-201ENST00000487100 792 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 AC006499.5-201ENST00000505037 514 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.93□□□□□ -1.78
ZIC3O60481 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.93□□□□□ -1.78
ZIC3O60481 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.93□□□□□ -1.78
ZIC3O60481 RNA5SP216-201ENST00000516111 123 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 RNU6-150P-201ENST00000516237 95 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.93□□□□□ -1.78
ZIC3O60481 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.93□□□□□ -1.78
ZIC3O60481 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.93□□□□□ -1.78
ZIC3O60481 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZIC3O60481 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.93□□□□□ -1.78
ZIC3O60481 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.93□□□□□ -1.78
ZIC3O60481 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.93□□□□□ -1.78
ZIC3O60481 GTF2IP22-201ENST00000554443 182 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 AL133457.1-201ENST00000564251 987 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.93□□□□□ -1.78
ZIC3O60481 AC090312.1-201ENST00000580637 348 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZIC3O60481 AC073544.2-201ENST00000601155 540 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 BNIP3P11-201ENST00000603878 563 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 AL354984.3-201ENST00000604803 325 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 RN7SKP299-201ENST00000606679 301 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 AL391497.1-201ENST00000608671 547 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 AC122108.2-201ENST00000611946 526 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.93□□□□□ -1.78
ZIC3O60481 AC009704.2-201ENST00000618739 483 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.93□□□□□ -1.78
ZIC3O60481 AC140479.6-201ENST00000633535 357 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZIC3O60481 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZIC3O60481 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZIC3O60481 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.93□□□□□ -1.78
ZIC3O60481 AP002907.1-201ENST00000606361 1430 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZIC3O60481 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZIC3O60481 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZIC3O60481 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.93□□□□□ -1.78
ZIC3O60481 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.93□□□□□ -1.78
ZIC3O60481 AL122126.1-201ENST00000546905 1318 ntBASIC3.93□□□□□ -1.78
ZIC3O60481 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ZIC3O60481 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.92□□□□□ -1.78
ZIC3O60481 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZIC3O60481 MAPK10-320ENST00000641462 6696 ntBASIC3.92□□□□□ -1.78
ZIC3O60481 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.92□□□□□ -1.78
ZIC3O60481 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZIC3O60481 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.92□□□□□ -1.78
ZIC3O60481 U3.4-201ENST00000363352 213 ntBASIC3.92□□□□□ -1.78
ZIC3O60481 RNA5SP366-201ENST00000365454 123 ntBASIC3.92□□□□□ -1.78
ZIC3O60481 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms