Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SGCEO43556 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SGCEO43556 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SGCEO43556 AL122126.1-201ENST00000546905 1318 ntBASIC3.05□□□□□ -1.92
SGCEO43556 RNA5SP124-201ENST00000362739 110 ntBASIC3.05□□□□□ -1.92
SGCEO43556 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.05□□□□□ -1.92
SGCEO43556 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.05□□□□□ -1.92
SGCEO43556 CYCSP4-201ENST00000429682 331 ntBASIC3.05□□□□□ -1.92
SGCEO43556 MTND2P21-201ENST00000436242 1042 ntBASIC3.05□□□□□ -1.92
SGCEO43556 AL133547.1-201ENST00000448546 220 ntBASIC3.05□□□□□ -1.92
SGCEO43556 RPL23AP67-201ENST00000465341 474 ntBASIC3.05□□□□□ -1.92
SGCEO43556 AC005726.1-201ENST00000494679 427 ntBASIC3.05□□□□□ -1.92
SGCEO43556 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
SGCEO43556 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.05□□□□□ -1.92
SGCEO43556 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.05□□□□□ -1.92
SGCEO43556 RNU6-760P-201ENST00000516078 97 ntBASIC3.05□□□□□ -1.92
SGCEO43556 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SGCEO43556 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.05□□□□□ -1.92
SGCEO43556 AC010306.1-201ENST00000523223 1117 ntBASIC3.05□□□□□ -1.92
SGCEO43556 AC109635.4-202ENST00000531666 412 ntBASIC3.05□□□□□ -1.92
SGCEO43556 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.05□□□□□ -1.92
SGCEO43556 AL442163.2-201ENST00000553912 710 ntBASIC3.05□□□□□ -1.92
SGCEO43556 AL163153.1-201ENST00000554223 283 ntBASIC3.05□□□□□ -1.92
SGCEO43556 MIR4474-201ENST00000579189 78 ntBASIC3.05□□□□□ -1.92
SGCEO43556 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.05□□□□□ -1.92
SGCEO43556 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SGCEO43556 AC016877.3-201ENST00000606778 504 ntBASIC3.05□□□□□ -1.92
SGCEO43556 AC011374.2-201ENST00000607135 526 ntBASIC3.05□□□□□ -1.92
SGCEO43556 AC004832.5-201ENST00000608677 401 ntBASIC3.05□□□□□ -1.92
SGCEO43556 AL356863.1-201ENST00000623378 1080 ntBASIC3.05□□□□□ -1.92
SGCEO43556 AL136164.4-201ENST00000625013 2135 ntBASIC3.05□□□□□ -1.92
SGCEO43556 AC093010.3-201ENST00000570269 15214 ntBASIC3.05□□□□□ -1.92
SGCEO43556 AC110774.1-201ENST00000623567 2018 ntBASIC3.05□□□□□ -1.92
SGCEO43556 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.05□□□□□ -1.92
SGCEO43556 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.04□□□□□ -1.92
SGCEO43556 AL161912.2-201ENST00000565707 3007 ntBASIC3.04□□□□□ -1.92
SGCEO43556 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SGCEO43556 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.04□□□□□ -1.92
SGCEO43556 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SGCEO43556 ZNF37BP-203ENST00000452306 1352 ntBASIC3.04□□□□□ -1.92
SGCEO43556 AL355578.1-201ENST00000607405 1328 ntBASIC3.04□□□□□ -1.92
SGCEO43556 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.04□□□□□ -1.92
SGCEO43556 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SGCEO43556 Y_RNA.126-201ENST00000363382 111 ntBASIC3.04□□□□□ -1.92
SGCEO43556 RNU6-1243P-201ENST00000364028 107 ntBASIC3.04□□□□□ -1.92
SGCEO43556 AC025750.1-201ENST00000399891 379 ntBASIC3.04□□□□□ -1.92
SGCEO43556 HMGB3P18-201ENST00000406327 590 ntBASIC3.04□□□□□ -1.92
SGCEO43556 RAB9AP3-201ENST00000412737 573 ntBASIC3.04□□□□□ -1.92
SGCEO43556 AC126124.2-201ENST00000413542 321 ntBASIC3.04□□□□□ -1.92
SGCEO43556 RPL36AP36-201ENST00000418616 301 ntBASIC3.04□□□□□ -1.92
SGCEO43556 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.04□□□□□ -1.92
SGCEO43556 AC018644.1-201ENST00000429934 551 ntBASIC3.04□□□□□ -1.92
SGCEO43556 TRIM60P18-201ENST00000441518 828 ntBASIC3.04□□□□□ -1.92
SGCEO43556 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SGCEO43556 AL359073.1-201ENST00000448036 403 ntBASIC3.04□□□□□ -1.92
SGCEO43556 RAB9AP1-201ENST00000449393 573 ntBASIC3.04□□□□□ -1.92
SGCEO43556 Z99714.1-201ENST00000450463 807 ntBASIC3.04□□□□□ -1.92
SGCEO43556 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.04□□□□□ -1.92
SGCEO43556 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.04□□□□□ -1.92
SGCEO43556 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
SGCEO43556 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.04□□□□□ -1.92
SGCEO43556 AC093663.1-201ENST00000497190 394 ntBASIC3.04□□□□□ -1.92
SGCEO43556 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.04□□□□□ -1.92
SGCEO43556 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.04□□□□□ -1.92
SGCEO43556 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.04□□□□□ -1.92
SGCEO43556 AC023632.4-201ENST00000517783 191 ntBASIC3.04□□□□□ -1.92
SGCEO43556 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.04□□□□□ -1.92
SGCEO43556 TRMT10BP1-201ENST00000519377 943 ntBASIC3.04□□□□□ -1.92
SGCEO43556 MED28P5-201ENST00000528254 438 ntBASIC3.04□□□□□ -1.92
SGCEO43556 AC103843.2-201ENST00000530523 682 ntBASIC3.04□□□□□ -1.92
SGCEO43556 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.04□□□□□ -1.92
SGCEO43556 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.04□□□□□ -1.92
SGCEO43556 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.04□□□□□ -1.92
SGCEO43556 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.04□□□□□ -1.92
SGCEO43556 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.04□□□□□ -1.92
SGCEO43556 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.04□□□□□ -1.92
SGCEO43556 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SGCEO43556 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.04□□□□□ -1.92
SGCEO43556 AC091488.1-201ENST00000604239 660 ntBASIC3.04□□□□□ -1.92
SGCEO43556 AC079610.2-201ENST00000604818 690 ntBASIC3.04□□□□□ -1.92
SGCEO43556 CR392039.5-201ENST00000623201 510 ntBASIC3.04□□□□□ -1.92
SGCEO43556 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SGCEO43556 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
SGCEO43556 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.03□□□□□ -1.92
SGCEO43556 AC058791.1-201ENST00000608412 3198 ntBASIC3.03□□□□□ -1.92
SGCEO43556 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.03□□□□□ -1.92
SGCEO43556 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SGCEO43556 AL365440.1-201ENST00000436135 2167 ntBASIC3.03□□□□□ -1.92
SGCEO43556 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SGCEO43556 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
SGCEO43556 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SGCEO43556 SNORA27.3-201ENST00000364937 134 ntBASIC3.03□□□□□ -1.92
SGCEO43556 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SGCEO43556 SNORA51.12-201ENST00000384448 134 ntBASIC3.03□□□□□ -1.92
SGCEO43556 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SGCEO43556 SKINT1L-201ENST00000401057 817 ntBASIC3.03□□□□□ -1.92
SGCEO43556 AL356967.1-201ENST00000406305 431 ntBASIC3.03□□□□□ -1.92
SGCEO43556 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.03□□□□□ -1.92
SGCEO43556 KCTD10P1-201ENST00000434203 625 ntBASIC3.03□□□□□ -1.92
SGCEO43556 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms