Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 RNU1-70P-201ENST00000362618 164 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 RNU6-354P-201ENST00000383862 107 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 RNU6-610P-201ENST00000384264 107 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AC234782.4-201ENST00000417646 1048 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AC073310.1-201ENST00000423226 1033 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 UBE2V1P1-201ENST00000430836 445 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 RPS6P12-201ENST00000432491 726 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AC115115.1-201ENST00000449927 248 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 RPL12P26-201ENST00000452430 487 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 RPL30P11-201ENST00000495304 339 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 MTCO3P27-201ENST00000514397 196 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AC008494.2-201ENST00000514544 370 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AC107934.2-201ENST00000518653 310 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 HIGD1AP1-201ENST00000550979 275 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 MIR3908-201ENST00000579798 126 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AC120053.1-201ENST00000607706 736 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AC112503.2-201ENST00000609005 552 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AP005229.2-201ENST00000609980 697 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 RMST_9.1-201ENST00000619945 193 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 MIR8057-201ENST00000620957 69 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AC110801.1-201ENST00000623590 212 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 AC017071.1-201ENST00000564407 2204 ntBASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMIM28A0A1B0GU29 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 MIR483-201ENST00000385070 76 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 RNA5SP239-201ENST00000410218 129 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AL356968.1-201ENST00000416622 474 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AC093422.3-201ENST00000428506 305 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 ELOCP11-201ENST00000436690 332 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AC006028.1-201ENST00000438379 402 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 ELOCP16-201ENST00000444494 332 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 GXYLT1P1-201ENST00000446657 490 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 HMGN1P5-201ENST00000448591 263 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AL096803.2-201ENST00000450032 677 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 DNAJC19P8-201ENST00000452887 259 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AL035407.2-201ENST00000454090 378 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AC008379.1-201ENST00000463655 464 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AC020893.1-201ENST00000502452 580 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 MIR2114-201ENST00000516645 80 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AC125494.3-201ENST00000602759 455 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 NTAN1P1-201ENST00000603150 646 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AC021851.1-201ENST00000608537 1082 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AC068880.4-201ENST00000623082 495 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AC024595.1-201ENST00000623088 387 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 AC132825.7-201ENST00000638744 335 ntBASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMIM28A0A1B0GU29 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC025125.1-201ENST00000624743 1922 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 RNU1-87P-201ENST00000363727 170 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 GCNT6-201ENST00000379591 934 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 RNU4-47P-201ENST00000410876 114 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 RPS7P5-201ENST00000441482 581 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC133473.1-201ENST00000455173 299 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms