Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.46□□□□□ -2.02
HLA-DRB4X5D2U9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DRB4X5D2U9 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 SNORA7.2-201ENST00000364446 145 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 ATP5F1P3-201ENST00000397213 657 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 TRGV7-201ENST00000427089 353 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 RPL37P1-201ENST00000432310 284 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 ATP5C1P1-201ENST00000441945 895 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 SSXP4-201ENST00000451349 245 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 UQCRHP3-201ENST00000451503 251 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 RPL21P10-201ENST00000463521 490 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 RN7SL293P-201ENST00000481765 281 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 RPL21P13-201ENST00000488305 481 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 SCARNA20.6-201ENST00000517251 106 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 HMGB1P23-201ENST00000518743 568 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 AC007458.1-201ENST00000542812 373 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 OR6C73P-201ENST00000546432 358 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 AC113194.1-201ENST00000606037 500 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 AC069234.5-201ENST00000611056 416 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 RMST_5.1-201ENST00000618704 126 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 AC015967.1-201ENST00000619893 476 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 API5P2-201ENST00000397055 1498 ntBASIC2.45□□□□□ -2.02
HLA-DRB4X5D2U9 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AC107081.3-201ENST00000612715 2034 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 MTCO1P12-201ENST00000414273 1543 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 SNORA51.2-201ENST00000364595 132 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 SAR1AP2-201ENST00000392696 594 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 ETF1P3-201ENST00000430422 1160 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 ARL4AP4-201ENST00000434170 518 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 HMGB3P11-201ENST00000440127 604 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 VN1R34P-201ENST00000447387 883 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 RPL29P29-201ENST00000448725 423 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 ST13P14-201ENST00000474095 734 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 RPS26P21-201ENST00000475397 348 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 RPL7P38-201ENST00000488396 739 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 RPL23AP55-201ENST00000498163 452 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AC147055.1-201ENST00000509261 750 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AC093755.1-201ENST00000512950 1023 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 CENPUP2-201ENST00000555897 1186 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 NCAPGP2-201ENST00000557911 754 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AC092868.3-201ENST00000560515 784 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AC034268.2-201ENST00000571784 482 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 MTCO3P24-201ENST00000572729 782 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AC069304.3-201ENST00000603938 1084 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 AC084035.1-201ENST00000634543 607 ntBASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DRB4X5D2U9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
HLA-DRB4X5D2U9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DRB4X5D2U9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.43□□□□□ -2.02
HLA-DRB4X5D2U9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
HLA-DRB4X5D2U9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DRB4X5D2U9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
HLA-DRB4X5D2U9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DRB4X5D2U9 RNU1-70P-201ENST00000362618 164 ntBASIC2.43□□□□□ -2.02
HLA-DRB4X5D2U9 RNA5SP119-201ENST00000362715 117 ntBASIC2.43□□□□□ -2.02
HLA-DRB4X5D2U9 RNU1-85P-201ENST00000364127 164 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms