Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 HMGN1P15-201ENST00000513870 295 ntBASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 MTCYBP41-201ENST00000528913 1123 ntBASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 AC006518.2-201ENST00000542513 940 ntBASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 MIR3690-201ENST00000580266 75 ntBASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 AC022146.1-201ENST00000595307 847 ntBASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 AL606490.9-201ENST00000603331 271 ntBASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 AC008759.3-201ENST00000613300 508 ntBASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 MIR6500-201ENST00000622700 86 ntBASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 AP000943.4-201ENST00000622912 357 ntBASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 AC068620.4-201ENST00000636730 1182 ntBASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 SGO1P1-201ENST00000603525 1447 ntBASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
AP4B1Q9Y6B7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 OTUD4P1-201ENST00000237841 3067 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 RNU6-353P-201ENST00000364266 108 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 RNU6-328P-201ENST00000390887 106 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 TAF13P2-201ENST00000416876 286 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC234064.1-201ENST00000436312 247 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC000041.1-201ENST00000439655 175 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 RANP8-201ENST00000444720 713 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 VN1R17P-201ENST00000472048 1090 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 SYPL1P1-201ENST00000473622 768 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC084198.1-201ENST00000477747 402 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 RPL7P47-201ENST00000497299 556 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 RNF138P1-201ENST00000502765 546 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 MTND5P21-201ENST00000531961 522 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC120057.2-201ENST00000571520 271 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC022069.1-201ENST00000582910 658 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC053481.4-201ENST00000583164 216 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 OR4G1P-201ENST00000588632 938 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC022916.3-201ENST00000592961 742 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 KLKP1-201ENST00000595979 403 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AL592436.1-201ENST00000605135 558 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 HSPE1P14-201ENST00000605812 302 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 ZNF37BP-203ENST00000452306 1352 ntBASIC3.59□□□□□ -1.83
AP4B1Q9Y6B7 AP002001.2-201ENST00000529025 1469 ntBASIC3.59□□□□□ -1.84
AP4B1Q9Y6B7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
AP4B1Q9Y6B7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 AL353746.1-201ENST00000566293 6881 ntBASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 RNA5SP399-201ENST00000364003 117 ntBASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 RNA5SP479-201ENST00000364858 117 ntBASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 MIR16-1-201ENST00000385271 89 ntBASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 AL136116.1-201ENST00000403591 381 ntBASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 AL355615.1-201ENST00000406187 641 ntBASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 VDAC1P3-201ENST00000434069 851 ntBASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 SEPT14P24-201ENST00000447236 180 ntBASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 AC006539.3-201ENST00000454258 129 ntBASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 AL136097.1-201ENST00000456945 913 ntBASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 RPL21P11-201ENST00000461458 483 ntBASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 AC015908.1-201ENST00000478739 476 ntBASIC3.58□□□□□ -1.84
AP4B1Q9Y6B7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms