Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 RNA5SP447-201ENST00000363749 119 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 OR6K3-202ENST00000368146 996 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 RNU6-730P-201ENST00000383954 104 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 RPL31P1-201ENST00000398116 372 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC069213.2-201ENST00000420238 366 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 RPL17P36-201ENST00000420302 549 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 MTCYBP15-201ENST00000433123 1127 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC022034.3-201ENST00000471393 478 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AL136126.1-201ENST00000473603 402 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 GAPDHP39-201ENST00000481866 979 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 RPS3AP50-201ENST00000487064 803 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC021146.5-201ENST00000503544 545 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AP000926.4-201ENST00000527351 454 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC092451.2-201ENST00000538746 658 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 LSM6P2-201ENST00000552208 177 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AGGF1P6-201ENST00000569213 976 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 IPO5P1-202ENST00000600039 287 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC019193.2-201ENST00000610012 634 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC018926.1-201ENST00000616335 435 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC018445.2-201ENST00000622987 260 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AC139713.2-210ENST00000641741 992 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AL732372.2-225ENST00000642124 456 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 AP001350.1-201ENST00000601906 1524 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 LARP1BP1-201ENST00000506036 1359 ntBASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
KCNIP3Q9Y2W7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 RNU6-582P-201ENST00000362989 107 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 RNU6-839P-201ENST00000363347 108 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 RNA5SP235-201ENST00000365411 114 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 RNU6-761P-201ENST00000384148 107 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 MIR550A3-201ENST00000390735 95 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 RNA5SP424-201ENST00000390988 115 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AL136116.1-201ENST00000403591 381 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 SNORA11.3-201ENST00000408471 128 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 FCF1P2-201ENST00000415284 583 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 Z97055.1-201ENST00000419730 712 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 FNDC3CP-201ENST00000420795 1155 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 RPL31P54-201ENST00000429803 370 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AL356276.2-201ENST00000435919 558 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 NDUFA5P7-201ENST00000452914 242 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 TRBV26-201ENST00000456572 344 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 VN1R17P-201ENST00000472048 1090 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 RPS27AP13-201ENST00000498403 237 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AC093801.2-201ENST00000503966 1050 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 PCBP2P3-201ENST00000509726 843 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 MTCYBP37-201ENST00000510642 1133 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 RNU6-885P-201ENST00000516607 104 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 RN7SKP289-201ENST00000517244 295 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 OR5AP1P-201ENST00000529730 940 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms