Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 RNU6-514P-201ENST00000384208 107 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AL357075.1-201ENST00000404107 726 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AC069218.2-201ENST00000411665 344 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AC079809.1-201ENST00000415468 276 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 RPL21P90-201ENST00000415692 466 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 BX323845.3-201ENST00000428215 527 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 GAPDHP53-201ENST00000458397 924 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 RN7SKP210-201ENST00000459176 261 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 RNU6-1037P-201ENST00000459571 107 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AC008481.1-201ENST00000463278 396 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 RN7SKP233-201ENST00000517005 110 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 TGIF1P1-201ENST00000558095 802 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AC023968.1-201ENST00000560719 475 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 MIR4502-201ENST00000580432 81 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AC008521.2-201ENST00000591021 259 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 BRDTP1-201ENST00000605735 677 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 uc_338.31-201ENST00000615595 186 ntBASIC6.7□□□□□ -1.34
LHX6Q9UPM6 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 AL162171.3-201ENST00000617439 3178 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 RNU6-312P-201ENST00000364629 107 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 RNU6-1289P-201ENST00000384431 106 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 HSPE1P8-201ENST00000406997 288 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 CHEK2P5-201ENST00000423877 246 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 AL590399.2-201ENST00000427536 309 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 RN7SL88P-201ENST00000480166 299 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 RN7SL362P-201ENST00000494228 267 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 RPL30P11-201ENST00000495304 339 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 RN7SL775P-201ENST00000498361 336 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 AC005840.1-201ENST00000498412 377 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 AC114947.2-201ENST00000565748 2125 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 MIR6768-201ENST00000610734 72 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 AL049539.1-201ENST00000611964 459 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 AC243654.2-201ENST00000612843 443 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 MIR8089-201ENST00000620165 82 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 AC010325.3-201ENST00000641084 394 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 AP003119.3-201ENST00000566747 4192 ntBASIC6.69□□□□□ -1.34
LHX6Q9UPM6 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LHX6Q9UPM6 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.68□□□□□ -1.34
LHX6Q9UPM6 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
LHX6Q9UPM6 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
LHX6Q9UPM6 AC034111.1-201ENST00000562143 3770 ntBASIC6.68□□□□□ -1.34
LHX6Q9UPM6 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
LHX6Q9UPM6 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
LHX6Q9UPM6 SALL1P1-201ENST00000438101 3837 ntBASIC6.68□□□□□ -1.34
LHX6Q9UPM6 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LHX6Q9UPM6 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
LHX6Q9UPM6 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.68□□□□□ -1.34
LHX6Q9UPM6 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LHX6Q9UPM6 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LHX6Q9UPM6 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LHX6Q9UPM6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms