Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AL163051.2-201ENST00000618976 735 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AC073569.3-201ENST00000619055 682 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AL109659.3-201ENST00000624985 950 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 SNORA50A-202ENST00000629536 136 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AC093010.3-201ENST00000570269 15214 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AL592494.2-201ENST00000425455 1548 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 OR4A15-201ENST00000314706 1035 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 SNORD56.4-201ENST00000363883 71 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 RNU6-1005P-201ENST00000384519 107 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 U8.11-201ENST00000384699 133 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 U8.12-201ENST00000384701 133 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 MIR607-201ENST00000385241 96 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 RN7SKP156-201ENST00000410308 342 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 MTCYBP24-201ENST00000420387 1106 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 VN1R42P-201ENST00000424651 344 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 BX679664.1-201ENST00000434429 253 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC004865.1-201ENST00000442276 1003 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 RNFT1P2-201ENST00000443064 757 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 MRPS31P2-201ENST00000451581 518 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 DNAJC19P8-201ENST00000452887 259 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 U8.18-201ENST00000459285 133 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 SNRPGP3-201ENST00000469405 227 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC084198.1-201ENST00000477747 402 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 RPS3AP50-201ENST00000487064 803 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC104108.1-201ENST00000509930 412 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 SETP12-201ENST00000514068 805 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 RNU6-488P-201ENST00000515918 99 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC104115.2-201ENST00000523026 687 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC024220.1-201ENST00000603675 484 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC018754.1-201ENST00000607486 925 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AL356118.1-201ENST00000635272 1078 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 OR8B1P-202ENST00000641132 1178 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC008432.1-201ENST00000615912 1320 ntBASIC3.17□□□□□ -1.9
DUX4Q9UBX2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.17□□□□□ -1.9
DUX4Q9UBX2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 RNA5SP124-201ENST00000362739 110 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 RPL7P60-201ENST00000397636 735 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 MTHFD2P2-201ENST00000407725 247 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 MIR1250-201ENST00000408098 113 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 RPS7P13-201ENST00000413955 498 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 RPS3AP9-201ENST00000417027 792 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 FAM204CP-201ENST00000424489 642 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 HIGD1AP12-201ENST00000427832 281 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 PTP4A1P3-201ENST00000433661 420 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 MRPS18BP2-201ENST00000434310 759 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 HMGB1P45-201ENST00000435986 653 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 YWHAZP8-201ENST00000436935 731 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 CYCSP43-201ENST00000438233 310 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms