Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC091965.5-201ENST00000624785 342 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL20A1Q9P218 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL20A1Q9P218 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL20A1Q9P218 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL20A1Q9P218 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL20A1Q9P218 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL20A1Q9P218 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL20A1Q9P218 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL20A1Q9P218 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL20A1Q9P218 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL20A1Q9P218 MTND5P24-201ENST00000438892 1767 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL20A1Q9P218 DDX43P2-201ENST00000604753 1354 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 SPRR2C-201ENST00000290702 219 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 Y_RNA.201-201ENST00000364052 96 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 SNORA68.2-201ENST00000391263 128 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 AL359643.1-201ENST00000404109 423 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 AL953862.1-201ENST00000423016 168 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 AC093698.1-201ENST00000423843 571 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 UBE2FP3-201ENST00000436366 524 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 RPL39P6-201ENST00000448289 150 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL20A1Q9P218 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 AC104164.2-201ENST00000496953 495 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 LTV1P1-201ENST00000510683 1237 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 MTND5P13-201ENST00000513046 1079 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 AC104057.1-201ENST00000515547 497 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 RNA5SP360-201ENST00000516555 118 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 AC106038.2-201ENST00000520706 568 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 AC006064.5-201ENST00000541782 248 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 BNIP3P5-201ENST00000562290 498 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 AC124068.1-201ENST00000563131 678 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 AP005136.1-201ENST00000579765 429 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.84□□□□□ -1.63
COL20A1Q9P218 AC078899.5-201ENST00000612475 178 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 AC022106.2-201ENST00000620114 757 ntBASIC4.84□□□□□ -1.63
COL20A1Q9P218 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL20A1Q9P218 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL20A1Q9P218 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
COL20A1Q9P218 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
COL20A1Q9P218 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
COL20A1Q9P218 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
COL20A1Q9P218 EOGT-210ENST00000615922 1931 ntBASIC4.84□□□□□ -1.64
COL20A1Q9P218 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL20A1Q9P218 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 NOL8P1-201ENST00000508336 3529 ntBASIC4.83□□□□□ -1.64
COL20A1Q9P218 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL20A1Q9P218 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL20A1Q9P218 RPL21P132-201ENST00000331267 462 ntBASIC4.83□□□□□ -1.64
COL20A1Q9P218 RNA5SP88-201ENST00000365560 109 ntBASIC4.83□□□□□ -1.64
COL20A1Q9P218 RNA5SP283-201ENST00000365604 119 ntBASIC4.83□□□□□ -1.64
COL20A1Q9P218 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 MIR1271-201ENST00000408537 86 ntBASIC4.83□□□□□ -1.64
COL20A1Q9P218 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 AC069218.2-201ENST00000411665 344 ntBASIC4.83□□□□□ -1.64
COL20A1Q9P218 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL20A1Q9P218 AC244035.1-201ENST00000430042 390 ntBASIC4.83□□□□□ -1.64
COL20A1Q9P218 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 BMS1P19-201ENST00000433925 393 ntBASIC4.83□□□□□ -1.64
COL20A1Q9P218 MTND1P30-201ENST00000441241 901 ntBASIC4.83□□□□□ -1.64
COL20A1Q9P218 GEMIN8P3-201ENST00000445417 720 ntBASIC4.83□□□□□ -1.64
COL20A1Q9P218 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL20A1Q9P218 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 TRGVB-201ENST00000453257 471 ntBASIC4.83□□□□□ -1.64
COL20A1Q9P218 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 AC090151.1-201ENST00000520784 730 ntBASIC4.83□□□□□ -1.64
COL20A1Q9P218 CYCSP2-201ENST00000558168 301 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms