Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 SMIM12P1-201ENST00000603004 274 ntBASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 AL354984.3-201ENST00000604803 325 ntBASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 MIR6128-201ENST00000615528 109 ntBASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 U6.101-201ENST00000637707 76 ntBASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 AL731566.1-201ENST00000620490 1937 ntBASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 AC011504.1-201ENST00000623331 4103 ntBASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 AC233263.6-201ENST00000631132 1963 ntBASIC6.17□□□□□ -1.42
CUEDC1Q9NWM3 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 Y_RNA.22-201ENST00000362492 102 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 RNA5SP394-201ENST00000364216 119 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 RNU6-343P-201ENST00000364709 104 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 RNA5SP485-201ENST00000365053 119 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 LCN1P2-201ENST00000372030 223 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 Y_RNA.478-201ENST00000384358 107 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 MIR558-201ENST00000384920 94 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 EIF4E2P1-201ENST00000393781 255 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AL023807.1-201ENST00000407932 359 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AC012075.1-201ENST00000436549 580 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 RPL7P28-201ENST00000437739 740 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 GM2AP2-201ENST00000491764 562 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 HMGN1P16-201ENST00000508308 283 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 RNU6-1038P-201ENST00000516516 104 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 IGKV1D-22-201ENST00000518953 324 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AC131281.1-201ENST00000522984 164 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AC073916.1-201ENST00000545095 130 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 MIR4502-201ENST00000580432 81 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AP005119.1-201ENST00000580956 292 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AC125232.2-201ENST00000592457 143 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AC078899.3-201ENST00000599065 212 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AL138895.2-201ENST00000603019 178 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AL121992.2-201ENST00000606262 256 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AL627230.1-201ENST00000613077 211 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 uc_338.12-201ENST00000616344 181 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 FTX_2.1-201ENST00000618816 94 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 U6.104-201ENST00000637979 90 ntBASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CUEDC1Q9NWM3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 OR55B1P-203ENST00000641518 2602 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 AC010401.2-201ENST00000575137 4934 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 AL359976.1-201ENST00000418655 3528 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 AC005332.5-201ENST00000591222 2919 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 SNORD16-201ENST00000362803 99 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 RN7SKP275-201ENST00000364626 301 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 Y_RNA.562-201ENST00000384695 113 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 MIR1302-6-201ENST00000408466 90 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 AL358176.3-201ENST00000420757 454 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms