Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 RPL17P12-201ENST00000413391 526 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC007738.1-201ENST00000413892 348 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC092647.1-201ENST00000420654 287 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC104333.2-201ENST00000422630 192 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 GLRXP1-201ENST00000423261 334 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 CACYBPP1-201ENST00000438592 684 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 ACTR3P2-201ENST00000439585 1257 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 UBE2V1P7-201ENST00000446395 340 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AL591623.2-201ENST00000449978 222 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 SNORD42A-201ENST00000459584 64 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC090142.1-201ENST00000465776 462 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 FAM92A1P2-202ENST00000504766 877 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC114781.4-201ENST00000513707 639 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC124947.2-202ENST00000552735 133 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC125257.1-201ENST00000560400 2930 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC138915.2-201ENST00000569776 97 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AP001004.1-201ENST00000582468 324 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC009643.2-201ENST00000603543 1448 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 SEPT7P9-203ENST00000604116 343 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC090948.2-201ENST00000607363 564 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC098614.4-201ENST00000607601 462 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC055764.2-201ENST00000610089 670 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC015726.3-201ENST00000624501 418 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC099654.10-201ENST00000640395 161 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AC107982.1-201ENST00000507171 1300 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 STX3-208ENST00000641815 3236 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AL731532.2-201ENST00000623542 1953 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 RN7SKP280-201ENST00000364196 304 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 CIR1P3-201ENST00000405137 479 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 RN7SKP222-201ENST00000410651 315 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 RPL23AP26-201ENST00000412728 464 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 HMGB1P31-201ENST00000437242 427 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 SNRPEP8-201ENST00000442866 260 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AP000797.1-201ENST00000478870 387 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 RPS27P23-201ENST00000487608 251 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AL358832.1-201ENST00000497800 389 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 NIFKP7-201ENST00000503365 834 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 SAP18P1-201ENST00000512058 390 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AP003730.1-201ENST00000524605 285 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 TRAV15-201ENST00000556680 249 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AC090525.3-201ENST00000605601 189 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AC107214.2-201ENST00000608204 634 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 DUXAP9-208ENST00000622815 614 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 CR381653.2-201ENST00000624041 768 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 MIR3653-201ENST00000625572 110 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms