Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 RNU6-202P-201ENST00000515998 96 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 RNU6-276P-201ENST00000516114 96 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 snoZ278.1-201ENST00000517059 112 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 PAICSP4-201ENST00000517543 1253 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AL121766.1-201ENST00000547436 487 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 TRAV15-201ENST00000556680 249 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 MIR1254-2-201ENST00000579553 63 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 MIR3158-1-201ENST00000583596 81 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AC090330.1-201ENST00000588646 764 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 VN1R79P-201ENST00000593540 513 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AC073387.2-201ENST00000604797 784 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AL121652.1-201ENST00000608851 448 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AC104763.3-201ENST00000613765 618 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC007685.1-201ENST00000329806 452 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 RNU1-18P-201ENST00000363062 164 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 PTMAP2-201ENST00000397627 327 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 SFR1P1-201ENST00000403720 688 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC004987.3-201ENST00000413879 771 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC009237.5-201ENST00000414271 501 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC245054.1-201ENST00000420944 258 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 SFR1P2-201ENST00000421841 730 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 RPL21P109-201ENST00000422213 475 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 GOT2P5-201ENST00000433995 546 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 PTGES3P1-201ENST00000439531 483 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC239367.2-201ENST00000447309 705 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 MTCO3P20-201ENST00000454926 688 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 RPL7P15-201ENST00000461190 712 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 PRELID3BP6-201ENST00000503839 571 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC104619.4-201ENST00000510773 249 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 RNU6-488P-201ENST00000515918 99 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 SNORA19.3-201ENST00000516165 130 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 SNORA70.14-201ENST00000516205 110 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 RANP9-201ENST00000519957 271 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC006518.1-201ENST00000541449 943 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC023161.2-201ENST00000551218 780 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC074029.1-201ENST00000552531 1044 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AL133457.1-201ENST00000564251 987 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 MIR4458-201ENST00000578872 75 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC069431.2-201ENST00000604149 1099 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC113194.1-201ENST00000606037 500 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC099654.9-201ENST00000637055 678 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC007823.1-201ENST00000569932 1566 ntBASIC3.38□□□□□ -1.87
C9orf40Q8IXQ3 AC107081.3-201ENST00000612715 2034 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms