Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 MIR3671-201ENST00000580455 88 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AC006116.3-201ENST00000592968 361 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AC018809.2-201ENST00000602436 3823 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 Y_RNA.812-201ENST00000610788 101 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AL049539.1-201ENST00000611964 459 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 Y_RNA.784-201ENST00000613803 101 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 Y_RNA.787-201ENST00000616522 101 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 Y_RNA.780-201ENST00000617336 101 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AC109583.2-201ENST00000617367 129 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 Y_RNA.801-201ENST00000619005 101 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AC040168.1-201ENST00000623594 991 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 MIR3662-201ENST00000637030 95 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC023421.1-201ENST00000590535 1785 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AL355834.1-201ENST00000556602 3965 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 SNORA16A-201ENST00000384342 137 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 RNU6-332P-201ENST00000391193 108 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 DUTP5-201ENST00000406790 469 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AMD1P2-201ENST00000412936 992 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC007390.1-201ENST00000415722 356 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC127526.1-201ENST00000417526 366 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC007161.1-204ENST00000423039 460 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC007283.2-201ENST00000424739 197 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC073410.1-201ENST00000435125 589 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 RPS11P7-201ENST00000442125 465 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC073850.1-201ENST00000449243 255 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 IGHV5-78-201ENST00000450948 295 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 RNU7-59P-201ENST00000459101 61 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 RNU6-261P-201ENST00000459506 102 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 RPL37P6-202ENST00000464216 403 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 RN7SL188P-201ENST00000469842 285 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 RPS29P25-201ENST00000481709 171 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 HMGN1P13-201ENST00000505795 138 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 MTND6P2-201ENST00000512226 524 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 CDH12P4-201ENST00000517835 295 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 CDH12P3-201ENST00000517935 295 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 CDH12P1-201ENST00000518435 295 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 IGKV2D-36-201ENST00000518643 226 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 OR4P1P-201ENST00000530808 1136 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 CBX3P5-201ENST00000552017 521 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 OR4T1P-201ENST00000554933 911 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 RPL21P12-201ENST00000559810 515 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 HMGB1P6-201ENST00000569046 646 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 MIR4458-201ENST00000578872 75 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC069307.1-201ENST00000602820 447 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC133644.2-201ENST00000608142 540 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AL391813.2-201ENST00000609113 322 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AL161637.1-201ENST00000622380 412 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 AC090574.1-201ENST00000623186 233 ntBASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
NPAS4Q8IUM7 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
NPAS4Q8IUM7 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
NPAS4Q8IUM7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms