Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 ENPP7P9-201ENST00000514456 627 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AC024224.1-201ENST00000538284 609 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 TPMTP1-201ENST00000592307 737 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AL451086.1-201ENST00000605596 223 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AL139286.2-201ENST00000606838 396 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AC103591.3-201ENST00000608684 209 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AC010678.1-201ENST00000614118 713 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 AL392088.2-201ENST00000637607 285 ntBASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.64□□□□□ -1.51
CCDC144BQ3MJ40 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 SNORA62-201ENST00000365493 153 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 RNU6-761P-201ENST00000384148 107 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 RPS3AP23-201ENST00000401762 784 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 RN7SKP247-201ENST00000411094 308 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 CDK8P2-201ENST00000415020 547 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 RSU1P2-202ENST00000437884 485 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 CDC27P1-201ENST00000445384 715 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AP000542.1-201ENST00000448473 371 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC090686.1-201ENST00000481577 749 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC079140.3-201ENST00000511111 550 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 OR4R3P-201ENST00000525084 838 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AP001880.2-201ENST00000538233 448 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 PDCD5P1-201ENST00000543528 309 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 HMGB3P26-201ENST00000560051 582 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC005771.1-201ENST00000585581 349 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC022916.3-201ENST00000592961 742 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC146944.4-201ENST00000602697 718 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC112230.1-201ENST00000604342 547 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC100793.4-201ENST00000613683 429 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 MIR8069-1-201ENST00000616627 86 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC108479.2-201ENST00000617314 601 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 MIR8069-2-201ENST00000621412 86 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AL590240.3-201ENST00000621416 943 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 NMD3P1-201ENST00000439704 1488 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 LINC01109-201ENST00000603837 3081 ntBASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC144BQ3MJ40 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 AC021242.1-201ENST00000507315 2035 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 OR5H15-201ENST00000383696 930 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 AL080315.1-201ENST00000406055 466 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 RPS12P5-201ENST00000423449 371 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 EZH2P1-201ENST00000431167 291 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 MTND1P28-201ENST00000435623 950 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 RPL7P36-201ENST00000444633 681 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 USP9YP29-201ENST00000445112 563 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 PDSS1P2-201ENST00000449397 678 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 AURKAPS2-201ENST00000454983 333 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 ARL2BPP4-201ENST00000506854 471 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 AC022447.1-201ENST00000515358 464 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 RN7SKP276-201ENST00000516242 268 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 AC079089.3-201ENST00000603094 673 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 BCRP9-201ENST00000605312 388 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms