Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 OR52E6-202ENST00000379946 954 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SIX1Q15475 MIR554-201ENST00000384874 96 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 AC093719.1-202ENST00000392735 373 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX1Q15475 DBIP2-201ENST00000419076 262 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 C1DP1-201ENST00000426049 402 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 NPM1P24-201ENST00000428039 894 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 AP000907.1-201ENST00000428428 510 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX1Q15475 BX679664.1-201ENST00000434429 253 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 RPS20P1-201ENST00000434853 354 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 AC234064.1-201ENST00000436312 247 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.67□□□□□ -1.82
SIX1Q15475 MTND1P33-201ENST00000446251 917 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX1Q15475 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SIX1Q15475 RPS3AP46-201ENST00000448352 682 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX1Q15475 AP000563.1-201ENST00000490865 758 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 RPL21P129-201ENST00000491732 478 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX1Q15475 AL139099.1-201ENST00000497398 403 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX1Q15475 RN7SKP283-201ENST00000517197 270 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX1Q15475 RANP9-201ENST00000519957 271 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 DEFB130C-202ENST00000530001 230 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 OR8K4P-201ENST00000534608 872 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 AC139103.1-201ENST00000534696 1030 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.67□□□□□ -1.82
SIX1Q15475 AC034105.4-201ENST00000568304 277 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX1Q15475 AC002487.1-201ENST00000604565 994 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 AC018926.3-201ENST00000618841 406 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIX1Q15475 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX1Q15475 AC007823.1-201ENST00000569932 1566 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX1Q15475 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX1Q15475 RNU1-87P-201ENST00000363727 170 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.66□□□□□ -1.82
SIX1Q15475 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX1Q15475 RNU6-224P-201ENST00000384055 107 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 AC007066.1-201ENST00000392902 381 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
SIX1Q15475 RPS3AP25-201ENST00000411660 793 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SIX1Q15475 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SIX1Q15475 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX1Q15475 AC092648.1-201ENST00000425870 423 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 HMGB3P5-201ENST00000428894 612 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 MRPS18BP2-201ENST00000434310 759 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 USP9YP24-201ENST00000434374 697 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 USP9YP17-201ENST00000444617 696 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX1Q15475 RPL12P26-201ENST00000452430 487 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 RPL37P3-201ENST00000456825 293 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SIX1Q15475 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SIX1Q15475 AC134050.1-201ENST00000495088 933 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 PRELID3BP7-201ENST00000503606 469 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX1Q15475 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.66□□□□□ -1.82
SIX1Q15475 RNU2-27P-201ENST00000516185 142 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 RNU6-416P-201ENST00000516265 103 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 SNORA70.18-201ENST00000516696 98 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 snoZ278.1-201ENST00000517059 112 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 MTCO3P15-201ENST00000526563 574 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX1Q15475 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.66□□□□□ -1.82
SIX1Q15475 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX1Q15475 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.66□□□□□ -1.82
SIX1Q15475 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX1Q15475 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.66□□□□□ -1.82
SIX1Q15475 AL355816.1-201ENST00000607951 118 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 AL121895.2-201ENST00000619558 447 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.66□□□□□ -1.82
SIX1Q15475 AC109454.4-201ENST00000623411 649 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 CR392039.4-201ENST00000624968 501 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX1Q15475 AC119744.1-201ENST00000454746 1715 ntBASIC3.66□□□□□ -1.82
SIX1Q15475 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX1Q15475 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.65□□□□□ -1.82
SIX1Q15475 AC022893.2-201ENST00000564832 3296 ntBASIC3.65□□□□□ -1.82
SIX1Q15475 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SIX1Q15475 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SIX1Q15475 RNA5SP51-201ENST00000364750 119 ntBASIC3.65□□□□□ -1.83
SIX1Q15475 MIR23B-201ENST00000384832 97 ntBASIC3.65□□□□□ -1.83
SIX1Q15475 RPL32P23-201ENST00000397237 405 ntBASIC3.65□□□□□ -1.83
SIX1Q15475 RN7SKP156-201ENST00000410308 342 ntBASIC3.65□□□□□ -1.83
SIX1Q15475 RNA5SP31-201ENST00000411144 127 ntBASIC3.65□□□□□ -1.83
SIX1Q15475 AL592310.1-201ENST00000414330 671 ntBASIC3.65□□□□□ -1.83
SIX1Q15475 AC234782.4-201ENST00000417646 1048 ntBASIC3.65□□□□□ -1.83
SIX1Q15475 RPS12P23-201ENST00000419579 400 ntBASIC3.65□□□□□ -1.83
SIX1Q15475 CYP4F29P-201ENST00000420685 446 ntBASIC3.65□□□□□ -1.83
SIX1Q15475 AL009174.1-201ENST00000426577 416 ntBASIC3.65□□□□□ -1.83
SIX1Q15475 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.65□□□□□ -1.83
SIX1Q15475 RPL21P110-201ENST00000433345 446 ntBASIC3.65□□□□□ -1.83
SIX1Q15475 AL035246.1-201ENST00000433554 1255 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms