Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 BX005019.1-201ENST00000561881 1810 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CACNA1SQ13698 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 SNORD56.3-201ENST00000363507 71 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 AL035407.1-201ENST00000429211 571 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 FGF7P3-201ENST00000454645 303 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 AC004801.2-202ENST00000463559 283 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 AC017007.3-201ENST00000479865 435 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 RN7SL20P-201ENST00000488827 297 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 VTA1P2-201ENST00000520205 911 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CACNA1SQ13698 AC027176.1-201ENST00000560204 514 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 AC009097.3-201ENST00000563557 1018 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CACNA1SQ13698 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CACNA1SQ13698 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CACNA1SQ13698 GABRG2-229ENST00000641017 3628 ntBASIC3.63□□□□□ -1.83
CACNA1SQ13698 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CACNA1SQ13698 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CACNA1SQ13698 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CACNA1SQ13698 AL139039.1-201ENST00000401900 692 ntBASIC3.63□□□□□ -1.83
CACNA1SQ13698 AL645937.1-202ENST00000421799 937 ntBASIC3.63□□□□□ -1.83
CACNA1SQ13698 AL445528.1-201ENST00000426330 420 ntBASIC3.63□□□□□ -1.83
CACNA1SQ13698 AC006539.3-201ENST00000454258 129 ntBASIC3.63□□□□□ -1.83
CACNA1SQ13698 VWA8P1-201ENST00000510889 176 ntBASIC3.63□□□□□ -1.83
CACNA1SQ13698 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.63□□□□□ -1.83
CACNA1SQ13698 SETP12-201ENST00000514068 805 ntBASIC3.63□□□□□ -1.83
CACNA1SQ13698 RN7SKP34-201ENST00000516142 244 ntBASIC3.63□□□□□ -1.83
CACNA1SQ13698 RN7SKP272-201ENST00000516988 232 ntBASIC3.63□□□□□ -1.83
CACNA1SQ13698 AC090819.1-201ENST00000523800 1111 ntBASIC3.63□□□□□ -1.83
CACNA1SQ13698 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.63□□□□□ -1.83
CACNA1SQ13698 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CACNA1SQ13698 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CACNA1SQ13698 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.62□□□□□ -1.83
CACNA1SQ13698 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.62□□□□□ -1.83
CACNA1SQ13698 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.62□□□□□ -1.83
CACNA1SQ13698 YWHAEP4-201ENST00000505390 198 ntBASIC3.62□□□□□ -1.83
CACNA1SQ13698 AC005351.1-201ENST00000511152 786 ntBASIC3.62□□□□□ -1.83
CACNA1SQ13698 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CACNA1SQ13698 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.62□□□□□ -1.83
CACNA1SQ13698 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CACNA1SQ13698 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.62□□□□□ -1.83
CACNA1SQ13698 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CACNA1SQ13698 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.62□□□□□ -1.83
CACNA1SQ13698 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CACNA1SQ13698 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CACNA1SQ13698 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.62□□□□□ -1.83
CACNA1SQ13698 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CACNA1SQ13698 RNU1-112P-201ENST00000364401 164 ntBASIC3.62□□□□□ -1.83
CACNA1SQ13698 AL138878.1-201ENST00000405131 347 ntBASIC3.62□□□□□ -1.83
CACNA1SQ13698 RPS6P12-201ENST00000432491 726 ntBASIC3.62□□□□□ -1.83
CACNA1SQ13698 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.62□□□□□ -1.83
CACNA1SQ13698 RN7SKP5-201ENST00000517045 272 ntBASIC3.62□□□□□ -1.83
CACNA1SQ13698 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.62□□□□□ -1.83
CACNA1SQ13698 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CACNA1SQ13698 AL049874.4-201ENST00000557593 255 ntBASIC3.62□□□□□ -1.83
CACNA1SQ13698 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CACNA1SQ13698 AL713998.2-201ENST00000604538 1198 ntBASIC3.62□□□□□ -1.83
CACNA1SQ13698 AL161912.3-201ENST00000605404 628 ntBASIC3.62□□□□□ -1.83
CACNA1SQ13698 AC078899.5-201ENST00000612475 178 ntBASIC3.62□□□□□ -1.83
CACNA1SQ13698 AC095050.2-201ENST00000510748 1458 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CACNA1SQ13698 AC134882.1-201ENST00000603738 1676 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CACNA1SQ13698 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CACNA1SQ13698 RNU6-146P-201ENST00000384602 108 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 SNORA67.4-201ENST00000384688 142 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 SKINT1L-201ENST00000401057 817 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 AC244033.1-201ENST00000426826 870 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 RPL21P40-201ENST00000428586 483 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 BX276092.4-201ENST00000452056 248 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 IFNWP4-201ENST00000453148 294 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CACNA1SQ13698 COX6B1P6-201ENST00000522347 255 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 RFPL1S-203ENST00000539579 330 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.61□□□□□ -1.83
CACNA1SQ13698 AL035413.2-201ENST00000604801 525 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 U7.8-201ENST00000619968 63 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CACNA1SQ13698 ELF2P3-201ENST00000445099 1506 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CACNA1SQ13698 AC010329.2-201ENST00000595195 2737 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.61□□□□□ -1.83
CACNA1SQ13698 AC008725.1-201ENST00000605123 2263 ntBASIC3.61□□□□□ -1.83
CACNA1SQ13698 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CACNA1SQ13698 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CACNA1SQ13698 RPL31P12-201ENST00000422587 358 ntBASIC3.6□□□□□ -1.83
CACNA1SQ13698 RPL23AP22-201ENST00000437556 453 ntBASIC3.6□□□□□ -1.83
CACNA1SQ13698 PPIAP17-201ENST00000438507 471 ntBASIC3.6□□□□□ -1.83
CACNA1SQ13698 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms