Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.43□□□□□ -1.7
PTCH1Q13635 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCH1Q13635 AF117829.1-206ENST00000621883 3802 ntBASIC4.43□□□□□ -1.7
PTCH1Q13635 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCH1Q13635 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCH1Q13635 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PTCH1Q13635 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PTCH1Q13635 AC069540.1-201ENST00000446320 988 ntBASIC4.42□□□□□ -1.7
PTCH1Q13635 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.42□□□□□ -1.7
PTCH1Q13635 MRPS31P2-201ENST00000451581 518 ntBASIC4.42□□□□□ -1.7
PTCH1Q13635 MIR4716-201ENST00000579628 84 ntBASIC4.42□□□□□ -1.7
PTCH1Q13635 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.42□□□□□ -1.7
PTCH1Q13635 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PTCH1Q13635 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTCH1Q13635 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCH1Q13635 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCH1Q13635 OR56A5-201ENST00000340110 738 ntBASIC4.41□□□□□ -1.7
PTCH1Q13635 AC062016.1-201ENST00000355719 319 ntBASIC4.41□□□□□ -1.7
PTCH1Q13635 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PTCH1Q13635 HMGB3P18-201ENST00000406327 590 ntBASIC4.41□□□□□ -1.7
PTCH1Q13635 AC013404.1-201ENST00000413068 249 ntBASIC4.41□□□□□ -1.7
PTCH1Q13635 AC105402.1-201ENST00000413336 545 ntBASIC4.41□□□□□ -1.7
PTCH1Q13635 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.41□□□□□ -1.7
PTCH1Q13635 RFESDP1-201ENST00000422350 461 ntBASIC4.41□□□□□ -1.7
PTCH1Q13635 RPS26P40-201ENST00000435209 294 ntBASIC4.41□□□□□ -1.7
PTCH1Q13635 AC105272.1-201ENST00000438604 198 ntBASIC4.41□□□□□ -1.7
PTCH1Q13635 AC016696.1-201ENST00000446949 318 ntBASIC4.41□□□□□ -1.7
PTCH1Q13635 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.41□□□□□ -1.7
PTCH1Q13635 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.41□□□□□ -1.7
PTCH1Q13635 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.41□□□□□ -1.7
PTCH1Q13635 IGLVIV-53-201ENST00000520107 367 ntBASIC4.41□□□□□ -1.7
PTCH1Q13635 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.41□□□□□ -1.7
PTCH1Q13635 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.41□□□□□ -1.7
PTCH1Q13635 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTCH1Q13635 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.41□□□□□ -1.7
PTCH1Q13635 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.41□□□□□ -1.7
PTCH1Q13635 RPL23AP92-201ENST00000603609 255 ntBASIC4.41□□□□□ -1.7
PTCH1Q13635 AC009948.4-201ENST00000604692 675 ntBASIC4.41□□□□□ -1.7
PTCH1Q13635 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.41□□□□□ -1.7
PTCH1Q13635 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCH1Q13635 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCH1Q13635 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.41□□□□□ -1.7
PTCH1Q13635 AL118496.1-201ENST00000440201 1812 ntBASIC4.41□□□□□ -1.7
PTCH1Q13635 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCH1Q13635 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTCH1Q13635 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTCH1Q13635 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTCH1Q13635 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PTCH1Q13635 AP002088.1-201ENST00000382740 395 ntBASIC4.4□□□□□ -1.7
PTCH1Q13635 Z98941.1-201ENST00000407764 100 ntBASIC4.4□□□□□ -1.7
PTCH1Q13635 SEC63P1-201ENST00000425785 1258 ntBASIC4.4□□□□□ -1.7
PTCH1Q13635 Z93242.1-201ENST00000427102 353 ntBASIC4.4□□□□□ -1.7
PTCH1Q13635 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.4□□□□□ -1.7
PTCH1Q13635 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.4□□□□□ -1.7
PTCH1Q13635 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.4□□□□□ -1.7
PTCH1Q13635 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.4□□□□□ -1.7
PTCH1Q13635 AC021146.1-201ENST00000511202 716 ntBASIC4.4□□□□□ -1.7
PTCH1Q13635 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.4□□□□□ -1.7
PTCH1Q13635 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.4□□□□□ -1.7
PTCH1Q13635 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
PTCH1Q13635 AL049870.4-201ENST00000555741 486 ntBASIC4.4□□□□□ -1.7
PTCH1Q13635 EIF5A2P1-201ENST00000564027 460 ntBASIC4.4□□□□□ -1.7
PTCH1Q13635 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.4□□□□□ -1.7
PTCH1Q13635 AC090525.3-201ENST00000605601 189 ntBASIC4.4□□□□□ -1.7
PTCH1Q13635 AC245100.7-201ENST00000609678 442 ntBASIC4.4□□□□□ -1.7
PTCH1Q13635 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTCH1Q13635 AC099506.2-201ENST00000623074 221 ntBASIC4.4□□□□□ -1.7
PTCH1Q13635 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.4□□□□□ -1.7
PTCH1Q13635 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PTCH1Q13635 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTCH1Q13635 AC017002.4-201ENST00000604721 1525 ntBASIC4.4□□□□□ -1.71
PTCH1Q13635 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.4□□□□□ -1.71
PTCH1Q13635 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTCH1Q13635 NUP35P1-201ENST00000422734 947 ntBASIC4.39□□□□□ -1.71
PTCH1Q13635 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.39□□□□□ -1.71
PTCH1Q13635 AL365396.1-201ENST00000430854 671 ntBASIC4.39□□□□□ -1.71
PTCH1Q13635 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.39□□□□□ -1.71
PTCH1Q13635 SLC31A1P1-201ENST00000451221 567 ntBASIC4.39□□□□□ -1.71
PTCH1Q13635 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.39□□□□□ -1.71
PTCH1Q13635 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.39□□□□□ -1.71
PTCH1Q13635 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.39□□□□□ -1.71
PTCH1Q13635 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.39□□□□□ -1.71
PTCH1Q13635 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTCH1Q13635 AC084757.1-201ENST00000559987 490 ntBASIC4.39□□□□□ -1.71
PTCH1Q13635 MIR4435-1-201ENST00000582552 80 ntBASIC4.39□□□□□ -1.71
PTCH1Q13635 NRBF2P5-201ENST00000603087 788 ntBASIC4.39□□□□□ -1.71
PTCH1Q13635 RMST_8.1-201ENST00000610287 165 ntBASIC4.39□□□□□ -1.71
PTCH1Q13635 AL359535.1-201ENST00000612100 1087 ntBASIC4.39□□□□□ -1.71
PTCH1Q13635 AC010149.2-201ENST00000637608 315 ntBASIC4.39□□□□□ -1.71
PTCH1Q13635 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
PTCH1Q13635 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTCH1Q13635 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTCH1Q13635 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.39□□□□□ -1.71
PTCH1Q13635 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTCH1Q13635 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTCH1Q13635 AL592437.2-201ENST00000421655 2434 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PTCH1Q13635 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCH1Q13635 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCH1Q13635 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms