Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RPS15AP38-201ENST00000413110 372 ntBASIC4.09□□□□□ -1.75
LTBQ06643 OR51A3P-201ENST00000413596 924 ntBASIC4.09□□□□□ -1.75
LTBQ06643 AC009302.1-201ENST00000417147 390 ntBASIC4.09□□□□□ -1.75
LTBQ06643 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.09□□□□□ -1.75
LTBQ06643 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.09□□□□□ -1.75
LTBQ06643 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.09□□□□□ -1.75
LTBQ06643 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.09□□□□□ -1.75
LTBQ06643 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.09□□□□□ -1.75
LTBQ06643 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.09□□□□□ -1.75
LTBQ06643 RPL21P110-201ENST00000433345 446 ntBASIC4.09□□□□□ -1.75
LTBQ06643 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.09□□□□□ -1.75
LTBQ06643 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.09□□□□□ -1.75
LTBQ06643 AC241584.1-201ENST00000438469 1241 ntBASIC4.09□□□□□ -1.75
LTBQ06643 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.09□□□□□ -1.75
LTBQ06643 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 EPS15P1-201ENST00000448836 336 ntBASIC4.09□□□□□ -1.75
LTBQ06643 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.09□□□□□ -1.75
LTBQ06643 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.09□□□□□ -1.75
LTBQ06643 SUMO2P2-201ENST00000456482 255 ntBASIC4.09□□□□□ -1.75
LTBQ06643 AC096751.1-202ENST00000502691 1067 ntBASIC4.09□□□□□ -1.75
LTBQ06643 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.09□□□□□ -1.75
LTBQ06643 AC093281.2-201ENST00000510153 597 ntBASIC4.09□□□□□ -1.75
LTBQ06643 AC109471.1-201ENST00000511631 612 ntBASIC4.09□□□□□ -1.75
LTBQ06643 AC010285.3-201ENST00000511668 676 ntBASIC4.09□□□□□ -1.75
LTBQ06643 RNU6-405P-201ENST00000516637 110 ntBASIC4.09□□□□□ -1.75
LTBQ06643 SCARNA13-201ENST00000516672 275 ntBASIC4.09□□□□□ -1.75
LTBQ06643 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.09□□□□□ -1.75
LTBQ06643 CYCSP29-201ENST00000533731 318 ntBASIC4.09□□□□□ -1.75
LTBQ06643 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.09□□□□□ -1.75
LTBQ06643 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.09□□□□□ -1.75
LTBQ06643 HMGB2P1-201ENST00000591146 634 ntBASIC4.09□□□□□ -1.75
LTBQ06643 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.09□□□□□ -1.75
LTBQ06643 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 AC106028.5-201ENST00000610332 395 ntBASIC4.09□□□□□ -1.75
LTBQ06643 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 AC013476.2-201ENST00000614456 459 ntBASIC4.09□□□□□ -1.75
LTBQ06643 MIR7844-201ENST00000616161 122 ntBASIC4.09□□□□□ -1.75
LTBQ06643 AC006133.1-201ENST00000617106 264 ntBASIC4.09□□□□□ -1.75
LTBQ06643 AL356266.1-201ENST00000623311 483 ntBASIC4.09□□□□□ -1.75
LTBQ06643 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
LTBQ06643 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
LTBQ06643 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.09□□□□□ -1.75
LTBQ06643 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.09□□□□□ -1.75
LTBQ06643 AC108467.2-201ENST00000617640 1597 ntBASIC4.09□□□□□ -1.75
LTBQ06643 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
LTBQ06643 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
LTBQ06643 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LTBQ06643 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
LTBQ06643 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LTBQ06643 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LTBQ06643 CPHL1P-201ENST00000461341 3407 ntBASIC4.08□□□□□ -1.76
LTBQ06643 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.08□□□□□ -1.76
LTBQ06643 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LTBQ06643 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LTBQ06643 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LTBQ06643 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LTBQ06643 RNU6-839P-201ENST00000363347 108 ntBASIC4.08□□□□□ -1.76
LTBQ06643 RNU6-660P-201ENST00000364566 109 ntBASIC4.08□□□□□ -1.76
LTBQ06643 RNU6-1300P-201ENST00000391046 108 ntBASIC4.08□□□□□ -1.76
LTBQ06643 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LTBQ06643 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
LTBQ06643 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.08□□□□□ -1.76
LTBQ06643 AC068533.2-201ENST00000411872 306 ntBASIC4.08□□□□□ -1.76
LTBQ06643 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.08□□□□□ -1.76
LTBQ06643 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.08□□□□□ -1.76
LTBQ06643 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LTBQ06643 AC099336.2-201ENST00000422457 254 ntBASIC4.08□□□□□ -1.76
LTBQ06643 AC104651.1-201ENST00000427559 735 ntBASIC4.08□□□□□ -1.76
LTBQ06643 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.08□□□□□ -1.76
LTBQ06643 USP9YP35-201ENST00000435696 412 ntBASIC4.08□□□□□ -1.76
LTBQ06643 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.08□□□□□ -1.76
LTBQ06643 UBE2V1P5-201ENST00000440070 405 ntBASIC4.08□□□□□ -1.76
LTBQ06643 MTATP6P23-201ENST00000440153 476 ntBASIC4.08□□□□□ -1.76
LTBQ06643 RPL23AP93-201ENST00000440847 484 ntBASIC4.08□□□□□ -1.76
LTBQ06643 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.08□□□□□ -1.76
LTBQ06643 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LTBQ06643 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.08□□□□□ -1.76
LTBQ06643 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.08□□□□□ -1.76
LTBQ06643 PHKBP1-201ENST00000450951 1951 ntBASIC4.08□□□□□ -1.76
LTBQ06643 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LTBQ06643 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.08□□□□□ -1.76
LTBQ06643 AC099560.2-201ENST00000457554 255 ntBASIC4.08□□□□□ -1.76
LTBQ06643 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.08□□□□□ -1.76
LTBQ06643 AC012158.1-204ENST00000483430 465 ntBASIC4.08□□□□□ -1.76
LTBQ06643 AC090013.1-201ENST00000485147 480 ntBASIC4.08□□□□□ -1.76
LTBQ06643 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.08□□□□□ -1.76
LTBQ06643 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LTBQ06643 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LTBQ06643 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LTBQ06643 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms