Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PRAMEP78395 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRAMEP78395 MTCO1P14-201ENST00000441695 1559 ntBASIC4.18□□□□□ -1.74
PRAMEP78395 MTCO1P24-201ENST00000515438 1558 ntBASIC4.18□□□□□ -1.74
PRAMEP78395 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRAMEP78395 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRAMEP78395 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PRAMEP78395 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PRAMEP78395 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PRAMEP78395 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.17□□□□□ -1.74
PRAMEP78395 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PRAMEP78395 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PRAMEP78395 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRAMEP78395 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
PRAMEP78395 RNU4-28P-201ENST00000364739 141 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PRAMEP78395 AL024474.1-201ENST00000404655 591 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 JKAMPP1-201ENST00000413804 919 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 OFD1P18Y-201ENST00000420889 959 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.17□□□□□ -1.74
PRAMEP78395 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.17□□□□□ -1.74
PRAMEP78395 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.17□□□□□ -1.74
PRAMEP78395 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.17□□□□□ -1.74
PRAMEP78395 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.17□□□□□ -1.74
PRAMEP78395 FTH1P6-201ENST00000430768 320 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.17□□□□□ -1.74
PRAMEP78395 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PRAMEP78395 ELOCP8-201ENST00000439309 332 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 MTND3P1-201ENST00000441336 220 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 ELOCP15-201ENST00000442090 332 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.17□□□□□ -1.74
PRAMEP78395 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.17□□□□□ -1.74
PRAMEP78395 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.17□□□□□ -1.74
PRAMEP78395 RPL39P6-201ENST00000448289 150 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.17□□□□□ -1.74
PRAMEP78395 AC146944.2-203ENST00000502493 354 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 AC021146.8-201ENST00000507455 733 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.17□□□□□ -1.74
PRAMEP78395 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.17□□□□□ -1.74
PRAMEP78395 AC139495.1-202ENST00000513164 354 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.17□□□□□ -1.74
PRAMEP78395 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.17□□□□□ -1.74
PRAMEP78395 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRAMEP78395 OR6C73P-201ENST00000546432 358 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.17□□□□□ -1.74
PRAMEP78395 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.17□□□□□ -1.74
PRAMEP78395 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.17□□□□□ -1.74
PRAMEP78395 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.17□□□□□ -1.74
PRAMEP78395 AL133457.1-201ENST00000564251 987 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 AL158211.1-201ENST00000566763 763 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.17□□□□□ -1.74
PRAMEP78395 AC022655.2-201ENST00000577280 318 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.17□□□□□ -1.74
PRAMEP78395 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.17□□□□□ -1.74
PRAMEP78395 IPO5P1-202ENST00000600039 287 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 AC012603.1-201ENST00000606424 528 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 AL159169.3-201ENST00000608871 561 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 AP005264.7-201ENST00000625003 745 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 MIR4278-201ENST00000636094 69 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.17□□□□□ -1.74
PRAMEP78395 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
PRAMEP78395 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
PRAMEP78395 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRAMEP78395 AC095050.2-201ENST00000510748 1458 ntBASIC4.17□□□□□ -1.74
PRAMEP78395 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.17□□□□□ -1.74
PRAMEP78395 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRAMEP78395 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRAMEP78395 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.16□□□□□ -1.74
PRAMEP78395 AP000776.1-201ENST00000530032 1663 ntBASIC4.16□□□□□ -1.74
PRAMEP78395 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRAMEP78395 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRAMEP78395 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRAMEP78395 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRAMEP78395 LINC02471-203ENST00000641941 4752 ntBASIC4.16□□□□□ -1.74
PRAMEP78395 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRAMEP78395 Y_RNA.311-201ENST00000365068 96 ntBASIC4.16□□□□□ -1.74
PRAMEP78395 RNA5SP366-201ENST00000365454 123 ntBASIC4.16□□□□□ -1.74
PRAMEP78395 RNU6-1122P-201ENST00000384449 107 ntBASIC4.16□□□□□ -1.74
PRAMEP78395 RNU4-78P-201ENST00000410940 126 ntBASIC4.16□□□□□ -1.74
PRAMEP78395 AC006960.1-201ENST00000419980 153 ntBASIC4.16□□□□□ -1.74
PRAMEP78395 AL391219.1-201ENST00000422570 483 ntBASIC4.16□□□□□ -1.74
PRAMEP78395 RPS27AP12-201ENST00000429552 465 ntBASIC4.16□□□□□ -1.74
PRAMEP78395 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.16□□□□□ -1.74
PRAMEP78395 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.16□□□□□ -1.74
PRAMEP78395 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.16□□□□□ -1.74
PRAMEP78395 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.16□□□□□ -1.74
PRAMEP78395 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.16□□□□□ -1.74
PRAMEP78395 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.16□□□□□ -1.74
PRAMEP78395 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRAMEP78395 AC109327.1-201ENST00000471666 403 ntBASIC4.16□□□□□ -1.74
PRAMEP78395 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.16□□□□□ -1.74
PRAMEP78395 AC108941.1-201ENST00000502853 530 ntBASIC4.16□□□□□ -1.74
PRAMEP78395 AC108475.1-201ENST00000507880 950 ntBASIC4.16□□□□□ -1.74
PRAMEP78395 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.16□□□□□ -1.74
PRAMEP78395 MRPS36P3-201ENST00000519284 130 ntBASIC4.16□□□□□ -1.74
PRAMEP78395 AP001636.2-201ENST00000525517 696 ntBASIC4.16□□□□□ -1.74
PRAMEP78395 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.16□□□□□ -1.74
PRAMEP78395 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms