Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC016559.2-201ENST00000510759 359 ntBASIC5.19□□□□□ -1.58
YBX1P67809 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.19□□□□□ -1.58
YBX1P67809 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.19□□□□□ -1.58
YBX1P67809 CDH12P4-201ENST00000517835 295 ntBASIC5.19□□□□□ -1.58
YBX1P67809 CDH12P3-201ENST00000517935 295 ntBASIC5.19□□□□□ -1.58
YBX1P67809 CDH12P1-201ENST00000518435 295 ntBASIC5.19□□□□□ -1.58
YBX1P67809 IGKV2-36-201ENST00000519999 223 ntBASIC5.19□□□□□ -1.58
YBX1P67809 AC087241.2-201ENST00000535801 324 ntBASIC5.19□□□□□ -1.58
YBX1P67809 PDCD5P1-201ENST00000543528 309 ntBASIC5.19□□□□□ -1.58
YBX1P67809 AL355836.1-201ENST00000555951 870 ntBASIC5.19□□□□□ -1.58
YBX1P67809 RPL10P14-201ENST00000565265 298 ntBASIC5.19□□□□□ -1.58
YBX1P67809 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.19□□□□□ -1.58
YBX1P67809 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
YBX1P67809 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.19□□□□□ -1.58
YBX1P67809 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.19□□□□□ -1.58
YBX1P67809 AC010525.2-201ENST00000590920 195 ntBASIC5.19□□□□□ -1.58
YBX1P67809 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.19□□□□□ -1.58
YBX1P67809 AC233309.1-201ENST00000619522 751 ntBASIC5.19□□□□□ -1.58
YBX1P67809 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
YBX1P67809 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
YBX1P67809 NUP58P1-201ENST00000502546 1738 ntBASIC5.19□□□□□ -1.58
YBX1P67809 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
YBX1P67809 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
YBX1P67809 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
YBX1P67809 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.19□□□□□ -1.58
YBX1P67809 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
YBX1P67809 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
YBX1P67809 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
YBX1P67809 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
YBX1P67809 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
YBX1P67809 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
YBX1P67809 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
YBX1P67809 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
YBX1P67809 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
YBX1P67809 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.18□□□□□ -1.58
YBX1P67809 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.18□□□□□ -1.58
YBX1P67809 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.18□□□□□ -1.58
YBX1P67809 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
YBX1P67809 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.18□□□□□ -1.58
YBX1P67809 RNU5E-1-201ENST00000362477 120 ntBASIC5.18□□□□□ -1.58
YBX1P67809 U3.2-201ENST00000362981 210 ntBASIC5.18□□□□□ -1.58
YBX1P67809 SNORA4.3-201ENST00000365564 137 ntBASIC5.18□□□□□ -1.58
YBX1P67809 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
YBX1P67809 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
YBX1P67809 RNA5SP339-201ENST00000390987 122 ntBASIC5.18□□□□□ -1.58
YBX1P67809 RNU6-1158P-201ENST00000391167 107 ntBASIC5.18□□□□□ -1.58
YBX1P67809 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
YBX1P67809 RNU2-9P-201ENST00000410194 145 ntBASIC5.18□□□□□ -1.58
YBX1P67809 MTND3P8-201ENST00000412909 339 ntBASIC5.18□□□□□ -1.58
YBX1P67809 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.18□□□□□ -1.58
YBX1P67809 HMGN2P27-201ENST00000427352 270 ntBASIC5.18□□□□□ -1.58
YBX1P67809 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.18□□□□□ -1.58
YBX1P67809 RPL7AP49-201ENST00000429522 581 ntBASIC5.18□□□□□ -1.58
YBX1P67809 AL591438.1-201ENST00000433508 581 ntBASIC5.18□□□□□ -1.58
YBX1P67809 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.18□□□□□ -1.58
YBX1P67809 IFNA20P-201ENST00000436840 528 ntBASIC5.18□□□□□ -1.58
YBX1P67809 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.18□□□□□ -1.58
YBX1P67809 AL035551.1-201ENST00000446931 348 ntBASIC5.18□□□□□ -1.58
YBX1P67809 AC104634.1-201ENST00000452720 462 ntBASIC5.18□□□□□ -1.58
YBX1P67809 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.18□□□□□ -1.58
YBX1P67809 RNU6-1170P-201ENST00000515974 106 ntBASIC5.18□□□□□ -1.58
YBX1P67809 SNORA40.12-201ENST00000516329 111 ntBASIC5.18□□□□□ -1.58
YBX1P67809 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.18□□□□□ -1.58
YBX1P67809 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.18□□□□□ -1.58
YBX1P67809 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.18□□□□□ -1.58
YBX1P67809 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.18□□□□□ -1.58
YBX1P67809 Z84480.1-201ENST00000605131 311 ntBASIC5.18□□□□□ -1.58
YBX1P67809 AC244107.2-201ENST00000611773 76 ntBASIC5.18□□□□□ -1.58
YBX1P67809 AC104237.2-201ENST00000612456 443 ntBASIC5.18□□□□□ -1.58
YBX1P67809 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.18□□□□□ -1.58
YBX1P67809 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.18□□□□□ -1.58
YBX1P67809 AL356585.4-201ENST00000623078 1229 ntBASIC5.18□□□□□ -1.58
YBX1P67809 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.18□□□□□ -1.58
YBX1P67809 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
YBX1P67809 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.18□□□□□ -1.58
YBX1P67809 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
YBX1P67809 AP001284.1-201ENST00000528393 2118 ntBASIC5.18□□□□□ -1.58
YBX1P67809 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
YBX1P67809 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
YBX1P67809 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.18□□□□□ -1.58
YBX1P67809 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
YBX1P67809 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
YBX1P67809 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
YBX1P67809 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
YBX1P67809 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.17□□□□□ -1.58
YBX1P67809 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
YBX1P67809 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
YBX1P67809 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
YBX1P67809 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
YBX1P67809 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
YBX1P67809 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
YBX1P67809 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
YBX1P67809 AL360270.2-201ENST00000562952 5985 ntBASIC5.17□□□□□ -1.58
YBX1P67809 AL512646.1-201ENST00000269395 1077 ntBASIC5.17□□□□□ -1.58
YBX1P67809 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
YBX1P67809 U3.7-201ENST00000363668 216 ntBASIC5.17□□□□□ -1.58
YBX1P67809 Y_RNA.184-201ENST00000363884 108 ntBASIC5.17□□□□□ -1.58
YBX1P67809 Y_RNA.202-201ENST00000364083 110 ntBASIC5.17□□□□□ -1.58
YBX1P67809 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
YBX1P67809 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms