Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH6P55285 AP002088.1-201ENST00000382740 395 ntBASIC3.54□□□□□ -1.84
CDH6P55285 RN7SKP285-201ENST00000410137 318 ntBASIC3.54□□□□□ -1.84
CDH6P55285 AC092745.2-202ENST00000411880 369 ntBASIC3.54□□□□□ -1.84
CDH6P55285 AC126124.2-201ENST00000413542 321 ntBASIC3.54□□□□□ -1.84
CDH6P55285 AL356968.1-201ENST00000416622 474 ntBASIC3.54□□□□□ -1.84
CDH6P55285 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH6P55285 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH6P55285 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH6P55285 MTND4LP7-201ENST00000431728 294 ntBASIC3.54□□□□□ -1.84
CDH6P55285 GOT2P5-201ENST00000433995 546 ntBASIC3.54□□□□□ -1.84
CDH6P55285 Z95327.1-201ENST00000446082 482 ntBASIC3.54□□□□□ -1.84
CDH6P55285 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH6P55285 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH6P55285 FTH1P2-201ENST00000466086 412 ntBASIC3.54□□□□□ -1.84
CDH6P55285 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH6P55285 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH6P55285 AC008565.1-201ENST00000509046 885 ntBASIC3.54□□□□□ -1.84
CDH6P55285 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH6P55285 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH6P55285 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH6P55285 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH6P55285 OR5D17P-201ENST00000531492 978 ntBASIC3.54□□□□□ -1.84
CDH6P55285 OR5B10P-201ENST00000532869 642 ntBASIC3.54□□□□□ -1.84
CDH6P55285 AC011602.1-201ENST00000546484 331 ntBASIC3.54□□□□□ -1.84
CDH6P55285 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH6P55285 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.54□□□□□ -1.84
CDH6P55285 AC006557.5-201ENST00000603126 811 ntBASIC3.54□□□□□ -1.84
CDH6P55285 OR2BH1P-201ENST00000608850 864 ntBASIC3.54□□□□□ -1.84
CDH6P55285 AC104307.1-201ENST00000616142 196 ntBASIC3.54□□□□□ -1.84
CDH6P55285 AL356490.1-201ENST00000623079 479 ntBASIC3.54□□□□□ -1.84
CDH6P55285 AC244258.1-201ENST00000637553 1071 ntBASIC3.54□□□□□ -1.84
CDH6P55285 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH6P55285 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH6P55285 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH6P55285 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CDH6P55285 PRO1804-201ENST00000623780 2050 ntBASIC3.53□□□□□ -1.84
CDH6P55285 SAGE4P-201ENST00000442271 3381 ntBASIC3.53□□□□□ -1.84
CDH6P55285 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH6P55285 RNU6-543P-201ENST00000362576 108 ntBASIC3.53□□□□□ -1.84
CDH6P55285 RNU4-35P-201ENST00000362588 141 ntBASIC3.53□□□□□ -1.84
CDH6P55285 RNA5SP197-201ENST00000363357 119 ntBASIC3.53□□□□□ -1.84
CDH6P55285 SNORD17-201ENST00000390930 237 ntBASIC3.53□□□□□ -1.84
CDH6P55285 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH6P55285 RPS29P4-201ENST00000414733 161 ntBASIC3.53□□□□□ -1.84
CDH6P55285 AC091286.1-201ENST00000431233 461 ntBASIC3.53□□□□□ -1.84
CDH6P55285 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH6P55285 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH6P55285 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH6P55285 AL513321.1-201ENST00000441175 761 ntBASIC3.53□□□□□ -1.84
CDH6P55285 AC239367.2-201ENST00000447309 705 ntBASIC3.53□□□□□ -1.84
CDH6P55285 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH6P55285 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH6P55285 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CDH6P55285 AP000893.1-201ENST00000474462 794 ntBASIC3.53□□□□□ -1.84
CDH6P55285 AC008885.2-201ENST00000509506 930 ntBASIC3.53□□□□□ -1.84
CDH6P55285 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH6P55285 HIGD1AP3-201ENST00000515857 278 ntBASIC3.53□□□□□ -1.84
CDH6P55285 AC083923.1-201ENST00000523708 376 ntBASIC3.53□□□□□ -1.84
CDH6P55285 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH6P55285 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH6P55285 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CDH6P55285 MIR3158-1-201ENST00000583596 81 ntBASIC3.53□□□□□ -1.84
CDH6P55285 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH6P55285 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.53□□□□□ -1.84
CDH6P55285 AC022146.1-201ENST00000595307 847 ntBASIC3.53□□□□□ -1.84
CDH6P55285 AC011468.4-201ENST00000603942 409 ntBASIC3.53□□□□□ -1.84
CDH6P55285 AP001033.2-201ENST00000609701 1003 ntBASIC3.53□□□□□ -1.84
CDH6P55285 MIR1264-201ENST00000616374 69 ntBASIC3.53□□□□□ -1.84
CDH6P55285 AC006133.1-201ENST00000617106 264 ntBASIC3.53□□□□□ -1.84
CDH6P55285 AC018926.3-201ENST00000618841 406 ntBASIC3.53□□□□□ -1.84
CDH6P55285 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CDH6P55285 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH6P55285 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH6P55285 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
CDH6P55285 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDH6P55285 AC058791.1-201ENST00000608412 3198 ntBASIC3.52□□□□□ -1.85
CDH6P55285 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH6P55285 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDH6P55285 OR5T3-201ENST00000303059 1023 ntBASIC3.52□□□□□ -1.85
CDH6P55285 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH6P55285 HMGB3P31-201ENST00000413333 595 ntBASIC3.52□□□□□ -1.85
CDH6P55285 BX842559.1-201ENST00000419615 532 ntBASIC3.52□□□□□ -1.85
CDH6P55285 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH6P55285 UBE2V1P1-201ENST00000430836 445 ntBASIC3.52□□□□□ -1.85
CDH6P55285 AC005189.1-201ENST00000431286 310 ntBASIC3.52□□□□□ -1.85
CDH6P55285 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH6P55285 SETP5-201ENST00000437270 562 ntBASIC3.52□□□□□ -1.85
CDH6P55285 NPM1P49-201ENST00000448027 714 ntBASIC3.52□□□□□ -1.85
CDH6P55285 AL513343.1-201ENST00000451818 792 ntBASIC3.52□□□□□ -1.85
CDH6P55285 SNORA84-201ENST00000459229 133 ntBASIC3.52□□□□□ -1.85
CDH6P55285 AC010401.1-201ENST00000463867 348 ntBASIC3.52□□□□□ -1.85
CDH6P55285 AC006499.5-201ENST00000505037 514 ntBASIC3.52□□□□□ -1.85
CDH6P55285 AC110768.1-201ENST00000509222 400 ntBASIC3.52□□□□□ -1.85
CDH6P55285 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDH6P55285 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH6P55285 SNORA26.10-201ENST00000516427 141 ntBASIC3.52□□□□□ -1.85
CDH6P55285 SNORA67.7-201ENST00000516664 135 ntBASIC3.52□□□□□ -1.85
CDH6P55285 AC104115.2-201ENST00000523026 687 ntBASIC3.52□□□□□ -1.85
CDH6P55285 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms