Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COPAP53621 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.72□□□□□ -1.65
COPAP53621 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COPAP53621 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COPAP53621 AL079343.1-201ENST00000572358 1771 ntBASIC4.71□□□□□ -1.66
COPAP53621 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
COPAP53621 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.71□□□□□ -1.66
COPAP53621 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
COPAP53621 RNU6-1243P-201ENST00000364028 107 ntBASIC4.71□□□□□ -1.66
COPAP53621 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.71□□□□□ -1.66
COPAP53621 RNU2-21P-201ENST00000410368 188 ntBASIC4.71□□□□□ -1.66
COPAP53621 RNU4-25P-201ENST00000410569 230 ntBASIC4.71□□□□□ -1.66
COPAP53621 VDAC1P9-201ENST00000412766 841 ntBASIC4.71□□□□□ -1.66
COPAP53621 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.71□□□□□ -1.66
COPAP53621 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.71□□□□□ -1.66
COPAP53621 CYCSP10-201ENST00000417973 294 ntBASIC4.71□□□□□ -1.66
COPAP53621 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.71□□□□□ -1.66
COPAP53621 AC244035.1-201ENST00000430042 390 ntBASIC4.71□□□□□ -1.66
COPAP53621 MTND1P20-201ENST00000430341 950 ntBASIC4.71□□□□□ -1.66
COPAP53621 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.71□□□□□ -1.66
COPAP53621 MTND4P6-201ENST00000438297 472 ntBASIC4.71□□□□□ -1.66
COPAP53621 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.71□□□□□ -1.66
COPAP53621 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COPAP53621 TRGVB-201ENST00000453257 471 ntBASIC4.71□□□□□ -1.66
COPAP53621 AC133473.1-201ENST00000455173 299 ntBASIC4.71□□□□□ -1.66
COPAP53621 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.71□□□□□ -1.66
COPAP53621 AP000926.1-201ENST00000479573 241 ntBASIC4.71□□□□□ -1.66
COPAP53621 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.71□□□□□ -1.66
COPAP53621 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.71□□□□□ -1.66
COPAP53621 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.71□□□□□ -1.66
COPAP53621 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COPAP53621 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.71□□□□□ -1.66
COPAP53621 MTCYBP37-201ENST00000510642 1133 ntBASIC4.71□□□□□ -1.66
COPAP53621 MTCYBP43-201ENST00000513621 740 ntBASIC4.71□□□□□ -1.66
COPAP53621 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.71□□□□□ -1.66
COPAP53621 DEFB131D-201ENST00000526803 184 ntBASIC4.71□□□□□ -1.66
COPAP53621 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.71□□□□□ -1.66
COPAP53621 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.71□□□□□ -1.66
COPAP53621 OR7K1P-201ENST00000546439 926 ntBASIC4.71□□□□□ -1.66
COPAP53621 FKBP1BP1-201ENST00000553366 325 ntBASIC4.71□□□□□ -1.66
COPAP53621 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.71□□□□□ -1.66
COPAP53621 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.71□□□□□ -1.66
COPAP53621 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.71□□□□□ -1.66
COPAP53621 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.71□□□□□ -1.66
COPAP53621 AC115286.1-201ENST00000604298 434 ntBASIC4.71□□□□□ -1.66
COPAP53621 AL590392.1-201ENST00000604960 446 ntBASIC4.71□□□□□ -1.66
COPAP53621 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.71□□□□□ -1.66
COPAP53621 AC092653.1-201ENST00000608509 531 ntBASIC4.71□□□□□ -1.66
COPAP53621 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.71□□□□□ -1.66
COPAP53621 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COPAP53621 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.71□□□□□ -1.66
COPAP53621 PCMTD1P7-201ENST00000634506 357 ntBASIC4.71□□□□□ -1.66
COPAP53621 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.71□□□□□ -1.66
COPAP53621 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COPAP53621 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
COPAP53621 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
COPAP53621 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
COPAP53621 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.71□□□□□ -1.66
COPAP53621 RAD17P1-201ENST00000418130 2042 ntBASIC4.7□□□□□ -1.66
COPAP53621 ZNF833P-201ENST00000424938 1494 ntBASIC4.7□□□□□ -1.66
COPAP53621 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COPAP53621 ELL2P4-201ENST00000446870 1376 ntBASIC4.7□□□□□ -1.66
COPAP53621 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COPAP53621 XIAPP3-201ENST00000312918 795 ntBASIC4.7□□□□□ -1.66
COPAP53621 RNU1-94P-201ENST00000362627 173 ntBASIC4.7□□□□□ -1.66
COPAP53621 RNU6-1226P-201ENST00000384317 107 ntBASIC4.7□□□□□ -1.66
COPAP53621 MT-TH-201ENST00000387441 69 ntBASIC4.7□□□□□ -1.66
COPAP53621 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
COPAP53621 SSXP10-201ENST00000402595 565 ntBASIC4.7□□□□□ -1.66
COPAP53621 ARL4AP5-201ENST00000404372 599 ntBASIC4.7□□□□□ -1.66
COPAP53621 AL080315.1-201ENST00000406055 466 ntBASIC4.7□□□□□ -1.66
COPAP53621 AL356967.1-201ENST00000406305 431 ntBASIC4.7□□□□□ -1.66
COPAP53621 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.7□□□□□ -1.66
COPAP53621 RPS15AP40-201ENST00000419621 391 ntBASIC4.7□□□□□ -1.66
COPAP53621 RSL24D1P6-201ENST00000426934 401 ntBASIC4.7□□□□□ -1.66
COPAP53621 MED14P1-201ENST00000430517 648 ntBASIC4.7□□□□□ -1.66
COPAP53621 BMS1P19-201ENST00000433925 393 ntBASIC4.7□□□□□ -1.66
COPAP53621 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.7□□□□□ -1.66
COPAP53621 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.7□□□□□ -1.66
COPAP53621 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.7□□□□□ -1.66
COPAP53621 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.7□□□□□ -1.66
COPAP53621 AL360221.1-201ENST00000445989 335 ntBASIC4.7□□□□□ -1.66
COPAP53621 AC104651.2-201ENST00000447549 528 ntBASIC4.7□□□□□ -1.66
COPAP53621 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.7□□□□□ -1.66
COPAP53621 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.7□□□□□ -1.66
COPAP53621 USP9YP10-201ENST00000454868 628 ntBASIC4.7□□□□□ -1.66
COPAP53621 TRBV26-201ENST00000456572 344 ntBASIC4.7□□□□□ -1.66
COPAP53621 SNORD108-201ENST00000459332 71 ntBASIC4.7□□□□□ -1.66
COPAP53621 RPS20P21-201ENST00000466859 343 ntBASIC4.7□□□□□ -1.66
COPAP53621 RN7SL41P-201ENST00000476144 297 ntBASIC4.7□□□□□ -1.66
COPAP53621 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.7□□□□□ -1.66
COPAP53621 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.7□□□□□ -1.66
COPAP53621 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.7□□□□□ -1.66
COPAP53621 AC112198.1-201ENST00000505369 1220 ntBASIC4.7□□□□□ -1.66
COPAP53621 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.7□□□□□ -1.66
COPAP53621 USP9YP5-201ENST00000511770 630 ntBASIC4.7□□□□□ -1.66
COPAP53621 AC007016.1-201ENST00000512110 244 ntBASIC4.7□□□□□ -1.66
COPAP53621 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.7□□□□□ -1.66
COPAP53621 AC104057.1-201ENST00000515547 497 ntBASIC4.7□□□□□ -1.66
COPAP53621 RN7SKP122-201ENST00000515923 296 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms