Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.4□□□□□ -1.87
HCFC1P51610 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.4□□□□□ -1.87
HCFC1P51610 AL139395.1-201ENST00000603662 160 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 RMST_9.1-201ENST00000619945 193 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 AC022079.1-201ENST00000621546 602 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 AL157770.1-201ENST00000623049 439 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.4□□□□□ -1.87
HCFC1P51610 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.4□□□□□ -1.87
HCFC1P51610 CU459211.1-201ENST00000635667 749 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 ZNF663P-202ENST00000641770 1131 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.4□□□□□ -1.87
HCFC1P51610 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HCFC1P51610 MARK2P15-201ENST00000432204 2186 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HCFC1P51610 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.4□□□□□ -1.87
HCFC1P51610 AC134882.1-201ENST00000603738 1676 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HCFC1P51610 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HCFC1P51610 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
HCFC1P51610 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.4□□□□□ -1.87
HCFC1P51610 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.4□□□□□ -1.87
HCFC1P51610 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.4□□□□□ -1.87
HCFC1P51610 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.39□□□□□ -1.87
HCFC1P51610 FAM133CP-201ENST00000332869 704 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 SNORD35B-201ENST00000363660 87 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 RNU4-68P-201ENST00000364314 141 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HCFC1P51610 TMSB4XP8-201ENST00000402089 135 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 RPL23AP48-201ENST00000406913 488 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 TMSB4XP6-201ENST00000415187 135 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 SYF2P2-201ENST00000417620 583 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 Z97055.1-201ENST00000419730 712 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 RPL7P53-201ENST00000421245 739 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.39□□□□□ -1.87
HCFC1P51610 RPS12P5-201ENST00000423449 371 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 TMSB4XP1-201ENST00000424567 135 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AL009174.1-201ENST00000426577 416 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 NPM1P24-201ENST00000428039 894 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 SNORA59A-201ENST00000459326 152 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 NAP1L1P3-201ENST00000462291 880 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AC069528.1-202ENST00000482888 637 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.39□□□□□ -1.87
HCFC1P51610 AC010285.3-201ENST00000511668 676 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 IGJP1-201ENST00000522682 475 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.39□□□□□ -1.87
HCFC1P51610 AC107918.3-201ENST00000533272 382 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HCFC1P51610 CYCSP30-201ENST00000546447 172 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.39□□□□□ -1.87
HCFC1P51610 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.39□□□□□ -1.87
HCFC1P51610 RPL23AP87-202ENST00000573039 466 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.39□□□□□ -1.87
HCFC1P51610 VN1R84P-201ENST00000593697 235 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AC020914.6-201ENST00000594327 272 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
HCFC1P51610 DPRXP5-201ENST00000604662 539 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AC064801.1-201ENST00000612025 407 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HCFC1P51610 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HCFC1P51610 AP005901.5-201ENST00000545779 1796 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AC022031.1-201ENST00000585985 2593 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
HCFC1P51610 AP004289.2-201ENST00000444413 1457 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.39□□□□□ -1.87
HCFC1P51610 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HCFC1P51610 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.39□□□□□ -1.87
HCFC1P51610 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HCFC1P51610 RNU5A-2P-201ENST00000384337 116 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 MIR218-2-201ENST00000385006 110 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AC093719.1-202ENST00000392735 373 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.39□□□□□ -1.87
HCFC1P51610 RPS7P15-201ENST00000415804 584 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 USP9YP26-201ENST00000421008 661 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 SETP8-201ENST00000435341 628 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AL354941.1-201ENST00000438600 464 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AC069285.2-201ENST00000440210 275 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.39□□□□□ -1.87
HCFC1P51610 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.39□□□□□ -1.87
HCFC1P51610 AC243772.1-201ENST00000451620 410 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AL121877.1-201ENST00000453704 622 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AL122001.1-201ENST00000457027 370 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AC005410.1-202ENST00000460347 485 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 RPS26P15-201ENST00000488067 348 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 DYNLL1P6-201ENST00000503440 264 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 PRELID3BP7-201ENST00000503606 469 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.39□□□□□ -1.87
HCFC1P51610 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.39□□□□□ -1.87
HCFC1P51610 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HCFC1P51610 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.39□□□□□ -1.87
HCFC1P51610 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.39□□□□□ -1.87
HCFC1P51610 AC090751.1-201ENST00000566966 267 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AC022968.1-201ENST00000567372 442 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AL354943.1-201ENST00000572103 781 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 MTCO1P40-201ENST00000574371 625 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 AC005344.1-201ENST00000613391 459 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 MIR8058-201ENST00000615737 89 ntBASIC3.39□□□□□ -1.87
HCFC1P51610 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HCFC1P51610 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.39□□□□□ -1.87
HCFC1P51610 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HCFC1P51610 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms