Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.16□□□□□ -1.9
LHX2P50458 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LHX2P50458 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
LHX2P50458 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LHX2P50458 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.16□□□□□ -1.9
LHX2P50458 AC006504.1-201ENST00000562493 3666 ntBASIC3.16□□□□□ -1.9
LHX2P50458 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LHX2P50458 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LHX2P50458 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.15□□□□□ -1.9
LHX2P50458 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
LHX2P50458 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LHX2P50458 AL353743.4-201ENST00000422653 1547 ntBASIC3.15□□□□□ -1.9
LHX2P50458 RNU4-35P-201ENST00000362588 141 ntBASIC3.15□□□□□ -1.91
LHX2P50458 RNA5SP50-201ENST00000363731 107 ntBASIC3.15□□□□□ -1.91
LHX2P50458 RNU6-468P-201ENST00000384003 109 ntBASIC3.15□□□□□ -1.91
LHX2P50458 RNU6-1257P-201ENST00000384625 110 ntBASIC3.15□□□□□ -1.91
LHX2P50458 SNORD17-201ENST00000390930 237 ntBASIC3.15□□□□□ -1.91
LHX2P50458 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.15□□□□□ -1.91
LHX2P50458 AL355615.1-201ENST00000406187 641 ntBASIC3.15□□□□□ -1.91
LHX2P50458 AL355143.1-201ENST00000407101 841 ntBASIC3.15□□□□□ -1.91
LHX2P50458 AC092745.2-202ENST00000411880 369 ntBASIC3.15□□□□□ -1.91
LHX2P50458 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.15□□□□□ -1.91
LHX2P50458 AC127526.1-201ENST00000417526 366 ntBASIC3.15□□□□□ -1.91
LHX2P50458 BX842559.1-201ENST00000419615 532 ntBASIC3.15□□□□□ -1.91
LHX2P50458 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.15□□□□□ -1.91
LHX2P50458 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.15□□□□□ -1.91
LHX2P50458 AC009965.2-201ENST00000425328 970 ntBASIC3.15□□□□□ -1.91
LHX2P50458 AP000907.1-201ENST00000428428 510 ntBASIC3.15□□□□□ -1.91
LHX2P50458 SKP1P1-201ENST00000438081 489 ntBASIC3.15□□□□□ -1.91
LHX2P50458 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.15□□□□□ -1.91
LHX2P50458 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.15□□□□□ -1.91
LHX2P50458 PPIAP3-201ENST00000450588 505 ntBASIC3.15□□□□□ -1.91
LHX2P50458 PRSS3P4-201ENST00000453323 162 ntBASIC3.15□□□□□ -1.91
LHX2P50458 MTCO3P20-201ENST00000454926 688 ntBASIC3.15□□□□□ -1.91
LHX2P50458 GTF2IP12-201ENST00000456547 356 ntBASIC3.15□□□□□ -1.91
LHX2P50458 CEACAMP4-201ENST00000457676 421 ntBASIC3.15□□□□□ -1.91
LHX2P50458 RPL21P18-201ENST00000469899 480 ntBASIC3.15□□□□□ -1.91
LHX2P50458 AC084357.1-201ENST00000473404 255 ntBASIC3.15□□□□□ -1.91
LHX2P50458 TRBV8-2-201ENST00000475637 270 ntBASIC3.15□□□□□ -1.91
LHX2P50458 AC025518.1-201ENST00000479856 347 ntBASIC3.15□□□□□ -1.91
LHX2P50458 AC012170.1-201ENST00000495139 359 ntBASIC3.15□□□□□ -1.91
LHX2P50458 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.15□□□□□ -1.91
LHX2P50458 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.15□□□□□ -1.91
LHX2P50458 AC008565.1-201ENST00000509046 885 ntBASIC3.15□□□□□ -1.91
LHX2P50458 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.15□□□□□ -1.91
LHX2P50458 IGKV2-23-201ENST00000518729 323 ntBASIC3.15□□□□□ -1.91
LHX2P50458 AC104115.2-201ENST00000523026 687 ntBASIC3.15□□□□□ -1.91
LHX2P50458 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.15□□□□□ -1.91
LHX2P50458 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.15□□□□□ -1.91
LHX2P50458 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.15□□□□□ -1.91
LHX2P50458 AC095057.3-201ENST00000567102 1157 ntBASIC3.15□□□□□ -1.91
LHX2P50458 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.15□□□□□ -1.91
LHX2P50458 RN7SL622P-201ENST00000585292 275 ntBASIC3.15□□□□□ -1.91
LHX2P50458 AL355816.1-201ENST00000607951 118 ntBASIC3.15□□□□□ -1.91
LHX2P50458 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.15□□□□□ -1.91
LHX2P50458 AL049777.1-201ENST00000622740 518 ntBASIC3.15□□□□□ -1.91
LHX2P50458 OR6C71P-202ENST00000641886 1107 ntBASIC3.15□□□□□ -1.91
LHX2P50458 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LHX2P50458 AC138393.1-206ENST00000540997 1886 ntBASIC3.15□□□□□ -1.91
LHX2P50458 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.15□□□□□ -1.91
LHX2P50458 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.15□□□□□ -1.91
LHX2P50458 MFSD8-233ENST00000641482 4860 ntBASIC3.15□□□□□ -1.91
LHX2P50458 PRO1804-201ENST00000623780 2050 ntBASIC3.15□□□□□ -1.91
LHX2P50458 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
LHX2P50458 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LHX2P50458 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LHX2P50458 ZNF849P-201ENST00000594711 1566 ntBASIC3.14□□□□□ -1.91
LHX2P50458 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LHX2P50458 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LHX2P50458 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LHX2P50458 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LHX2P50458 MIR208A-201ENST00000362287 71 ntBASIC3.14□□□□□ -1.91
LHX2P50458 SNORD46.1-201ENST00000364139 104 ntBASIC3.14□□□□□ -1.91
LHX2P50458 RNU6-283P-201ENST00000364788 107 ntBASIC3.14□□□□□ -1.91
LHX2P50458 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LHX2P50458 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
LHX2P50458 AL024507.1-201ENST00000412741 274 ntBASIC3.14□□□□□ -1.91
LHX2P50458 MTND4P22-201ENST00000413116 1169 ntBASIC3.14□□□□□ -1.91
LHX2P50458 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.14□□□□□ -1.91
LHX2P50458 AC017079.2-201ENST00000416102 485 ntBASIC3.14□□□□□ -1.91
LHX2P50458 AC092832.1-201ENST00000422934 400 ntBASIC3.14□□□□□ -1.91
LHX2P50458 RPL30P3-201ENST00000424262 333 ntBASIC3.14□□□□□ -1.91
LHX2P50458 RPS6P14-201ENST00000425165 719 ntBASIC3.14□□□□□ -1.91
LHX2P50458 RPL21P110-201ENST00000433345 446 ntBASIC3.14□□□□□ -1.91
LHX2P50458 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.14□□□□□ -1.91
LHX2P50458 TPTE2P6-202ENST00000445572 1007 ntBASIC3.14□□□□□ -1.91
LHX2P50458 GXYLT1P1-201ENST00000446657 490 ntBASIC3.14□□□□□ -1.91
LHX2P50458 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.14□□□□□ -1.91
LHX2P50458 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.14□□□□□ -1.91
LHX2P50458 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.14□□□□□ -1.91
LHX2P50458 RPL7P49-201ENST00000471402 708 ntBASIC3.14□□□□□ -1.91
LHX2P50458 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.14□□□□□ -1.91
LHX2P50458 SETP14-201ENST00000497538 873 ntBASIC3.14□□□□□ -1.91
LHX2P50458 AC026784.1-201ENST00000507986 352 ntBASIC3.14□□□□□ -1.91
LHX2P50458 RNU2-27P-201ENST00000516185 142 ntBASIC3.14□□□□□ -1.91
LHX2P50458 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.14□□□□□ -1.91
LHX2P50458 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.14□□□□□ -1.91
LHX2P50458 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.14□□□□□ -1.91
LHX2P50458 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.14□□□□□ -1.91
LHX2P50458 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms