Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MIR5187-201ENST00000583479 76 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.17□□□□□ -1.9
CX3CR1P49238 AC113368.1-201ENST00000603736 382 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 AC016542.1-201ENST00000608259 493 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.17□□□□□ -1.9
CX3CR1P49238 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CR1P49238 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.17□□□□□ -1.9
CX3CR1P49238 AP001350.1-201ENST00000601906 1524 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CX3CR1P49238 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CX3CR1P49238 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.16□□□□□ -1.9
CX3CR1P49238 AC007656.2-201ENST00000624902 4547 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CX3CR1P49238 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CX3CR1P49238 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.16□□□□□ -1.9
CX3CR1P49238 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CX3CR1P49238 ZNF734P-201ENST00000419494 1534 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CX3CR1P49238 Y_RNA.493-201ENST00000384422 102 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 SFR1P1-201ENST00000403720 688 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 AP000567.1-201ENST00000406413 156 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 RNU4-27P-201ENST00000410889 139 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 Y_RNA.625-201ENST00000411256 107 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CX3CR1P49238 AC004975.1-201ENST00000428733 208 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 AC073508.1-201ENST00000428866 656 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.16□□□□□ -1.9
CX3CR1P49238 HMGB1P12-201ENST00000438594 598 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 ELOCP13-201ENST00000443934 329 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.16□□□□□ -1.9
CX3CR1P49238 snoU13.3-201ENST00000459441 104 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 AL133162.1-201ENST00000463228 453 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 RPL6P9-201ENST00000466502 859 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.16□□□□□ -1.9
CX3CR1P49238 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.16□□□□□ -1.9
CX3CR1P49238 RNU6-416P-201ENST00000516265 103 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 IGJP1-201ENST00000522682 475 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 AP001207.1-201ENST00000524051 481 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CX3CR1P49238 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.16□□□□□ -1.9
CX3CR1P49238 AC109635.4-202ENST00000531666 412 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CX3CR1P49238 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.16□□□□□ -1.9
CX3CR1P49238 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.16□□□□□ -1.9
CX3CR1P49238 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.16□□□□□ -1.9
CX3CR1P49238 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.16□□□□□ -1.9
CX3CR1P49238 AC023824.3-201ENST00000569003 562 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 MIR5685-201ENST00000579080 79 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 AC006077.1-201ENST00000604746 343 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 AC006023.2-201ENST00000609916 167 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 AC020923.1-201ENST00000624021 917 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 AC092184.1-201ENST00000625042 715 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.16□□□□□ -1.9
CX3CR1P49238 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CX3CR1P49238 AL355578.1-201ENST00000607405 1328 ntBASIC3.16□□□□□ -1.9
CX3CR1P49238 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CX3CR1P49238 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.15□□□□□ -1.9
CX3CR1P49238 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.15□□□□□ -1.9
CX3CR1P49238 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.15□□□□□ -1.91
CX3CR1P49238 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CX3CR1P49238 RNU6-792P-201ENST00000363490 107 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 RNA5SP42-201ENST00000364278 115 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CX3CR1P49238 RPL7P60-201ENST00000397636 735 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.15□□□□□ -1.91
CX3CR1P49238 AL136116.1-201ENST00000403591 381 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 RNA5SP56-201ENST00000410277 118 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 RNU2-71P-201ENST00000411395 189 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 RPS15AP6-201ENST00000420703 385 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 AL009174.1-201ENST00000426577 416 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 RPP40P1-201ENST00000426762 456 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 AL158071.1-201ENST00000430315 461 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 MTND4P15-201ENST00000437913 1033 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.15□□□□□ -1.91
CX3CR1P49238 RPL7P52-201ENST00000449200 742 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 NUTF2P7-201ENST00000453086 375 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 AC087312.1-201ENST00000471411 480 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 AC093267.1-201ENST00000489176 961 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.15□□□□□ -1.91
CX3CR1P49238 HMGB1P22-201ENST00000505315 124 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.15□□□□□ -1.91
CX3CR1P49238 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 IGKV2-23-201ENST00000518729 323 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
CX3CR1P49238 AP001636.2-201ENST00000525517 696 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 HIGD1AP10-201ENST00000527837 282 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.15□□□□□ -1.91
CX3CR1P49238 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.15□□□□□ -1.91
CX3CR1P49238 HSPE1P5-201ENST00000561489 272 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.15□□□□□ -1.91
CX3CR1P49238 AC010735.1-201ENST00000567305 1026 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.15□□□□□ -1.91
CX3CR1P49238 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.15□□□□□ -1.91
CX3CR1P49238 AC022069.1-201ENST00000582910 658 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.15□□□□□ -1.91
CX3CR1P49238 RNU1-30P-201ENST00000606575 163 ntBASIC3.15□□□□□ -1.91
CX3CR1P49238 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.15□□□□□ -1.91
CX3CR1P49238 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.15□□□□□ -1.91
CX3CR1P49238 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.15□□□□□ -1.91
CX3CR1P49238 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms