Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AL163642.2-201ENST00000604722 1019 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AC105148.1-201ENST00000604961 409 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 HSPE1P14-201ENST00000605812 302 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AP002802.2-201ENST00000605877 235 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AP000240.1-201ENST00000609910 452 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AL391834.2-201ENST00000609982 546 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 MIR7851-201ENST00000610611 160 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 RNU6-1192P-201ENST00000612197 107 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TNFRSF4P43489 RNU6-489P-201ENST00000618289 107 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AC126544.2-201ENST00000625174 749 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 AP000553.6-201ENST00000641242 118 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TNFRSF4P43489 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
TNFRSF4P43489 AL365440.1-201ENST00000436135 2167 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AL133412.1-201ENST00000380194 2992 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AL356489.2-201ENST00000566968 3528 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TNFRSF4P43489 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
TNFRSF4P43489 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TNFRSF4P43489 SNORD9-201ENST00000362566 104 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 RNA5SP50-201ENST00000363731 107 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 MIR483-201ENST00000385070 76 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 MIR708-201ENST00000390708 88 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 SSXP10-201ENST00000402595 565 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 RNA5SP239-201ENST00000410218 129 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 RPS3AP9-201ENST00000417027 792 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC092832.1-201ENST00000422934 400 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC096632.1-201ENST00000427395 310 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 HIGD1AP12-201ENST00000427832 281 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 TPTE2P3-201ENST00000441562 1189 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC104978.1-201ENST00000449387 391 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC098824.1-201ENST00000453565 980 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 RPL32P34-201ENST00000486380 400 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 RNF138P1-201ENST00000502765 546 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC119751.4-201ENST00000507498 357 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC048346.1-201ENST00000510247 144 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 MTCO1P24-201ENST00000515438 1558 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 HIGD1AP3-201ENST00000515857 278 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 OR6C73P-201ENST00000546432 358 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC074051.3-201ENST00000570238 358 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC011458.1-201ENST00000604034 617 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 AL009028.1-201ENST00000604895 802 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC012603.1-201ENST00000606424 528 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 AF129408.1-201ENST00000608767 431 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TNFRSF4P43489 AC121761.2-201ENST00000617300 689 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFRSF4P43489 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
TNFRSF4P43489 MTND5P3-201ENST00000438536 1800 ntBASIC3.74□□□□□ -1.81
TNFRSF4P43489 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TNFRSF4P43489 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TNFRSF4P43489 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TNFRSF4P43489 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 MTCO1P14-201ENST00000441695 1559 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TNFRSF4P43489 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TNFRSF4P43489 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TNFRSF4P43489 RNU6-236P-201ENST00000363886 106 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TNFRSF4P43489 RNU6-1257P-201ENST00000384625 110 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 RNU6-1000P-201ENST00000391066 106 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 MCTS2P-201ENST00000394552 546 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 HLFP1-201ENST00000402375 499 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 RSL24D1P1-201ENST00000404972 493 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 MTCO3P31-201ENST00000405526 789 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 AL355379.1-201ENST00000405542 640 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 MIR1250-201ENST00000408098 113 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 EIF4EP1-201ENST00000422311 642 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 FTH1P6-201ENST00000430768 320 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 AC011742.1-201ENST00000431448 434 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 AL590399.6-201ENST00000446396 307 ntBASIC3.73□□□□□ -1.81
TNFRSF4P43489 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.73□□□□□ -1.81
TNFRSF4P43489 NF1P3-201ENST00000457709 450 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms