Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HTTP42858 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC3□□□□□ -1.93
HTTP42858 RN7SKP58-201ENST00000411010 305 ntBASIC3□□□□□ -1.93
HTTP42858 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3□□□□□ -1.93
HTTP42858 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3□□□□□ -1.93
HTTP42858 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3□□□□□ -1.93
HTTP42858 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3□□□□□ -1.93
HTTP42858 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
HTTP42858 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
HTTP42858 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3□□□□□ -1.93
HTTP42858 ISCA1P2-201ENST00000438679 421 ntBASIC2.99□□□□□ -1.93
HTTP42858 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.99□□□□□ -1.93
HTTP42858 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.99□□□□□ -1.93
HTTP42858 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.99□□□□□ -1.93
HTTP42858 AC011602.1-201ENST00000546484 331 ntBASIC2.99□□□□□ -1.93
HTTP42858 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.99□□□□□ -1.93
HTTP42858 AC009101.1-201ENST00000568135 242 ntBASIC2.99□□□□□ -1.93
HTTP42858 AC022884.3-201ENST00000579571 248 ntBASIC2.99□□□□□ -1.93
HTTP42858 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC2.99□□□□□ -1.93
HTTP42858 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HTTP42858 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
HTTP42858 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HTTP42858 MIR448-201ENST00000362131 111 ntBASIC2.99□□□□□ -1.93
HTTP42858 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.99□□□□□ -1.93
HTTP42858 AC078814.3-201ENST00000553036 491 ntBASIC2.99□□□□□ -1.93
HTTP42858 TRAV37-201ENST00000553906 342 ntBASIC2.99□□□□□ -1.93
HTTP42858 MIR27B-201ENST00000385129 97 ntBASIC2.99□□□□□ -1.93
HTTP42858 RNU6-55P-201ENST00000411092 107 ntBASIC2.99□□□□□ -1.93
HTTP42858 RNU6-954P-201ENST00000411355 107 ntBASIC2.99□□□□□ -1.93
HTTP42858 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.99□□□□□ -1.93
HTTP42858 AC048351.1-201ENST00000420064 602 ntBASIC2.99□□□□□ -1.93
HTTP42858 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.99□□□□□ -1.93
HTTP42858 HMGN1P5-201ENST00000448591 263 ntBASIC2.99□□□□□ -1.93
HTTP42858 SCGB1D5P-201ENST00000515134 247 ntBASIC2.99□□□□□ -1.93
HTTP42858 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
HTTP42858 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.99□□□□□ -1.93
HTTP42858 AC007621.1-201ENST00000604544 437 ntBASIC2.99□□□□□ -1.93
HTTP42858 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
HTTP42858 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
HTTP42858 AL161431.1-201ENST00000618966 4205 ntBASIC2.99□□□□□ -1.93
HTTP42858 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HTTP42858 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.99□□□□□ -1.93
HTTP42858 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HTTP42858 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
HTTP42858 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HTTP42858 RN7SKP210-201ENST00000459176 261 ntBASIC2.98□□□□□ -1.93
HTTP42858 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HTTP42858 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HTTP42858 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.98□□□□□ -1.93
HTTP42858 AC012020.1-201ENST00000624541 1728 ntBASIC2.98□□□□□ -1.93
HTTP42858 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HTTP42858 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC2.98□□□□□ -1.93
HTTP42858 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HTTP42858 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HTTP42858 AL359511.1-201ENST00000402970 211 ntBASIC2.98□□□□□ -1.93
HTTP42858 OR2X1P-201ENST00000421144 687 ntBASIC2.98□□□□□ -1.93
HTTP42858 HMGB3P11-201ENST00000440127 604 ntBASIC2.98□□□□□ -1.93
HTTP42858 HIGD1AP2-201ENST00000446367 280 ntBASIC2.98□□□□□ -1.93
HTTP42858 OR4G11P-201ENST00000492842 939 ntBASIC2.98□□□□□ -1.93
HTTP42858 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HTTP42858 OR5BN1P-201ENST00000532955 829 ntBASIC2.98□□□□□ -1.93
HTTP42858 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.98□□□□□ -1.93
HTTP42858 AC022069.1-201ENST00000582910 658 ntBASIC2.98□□□□□ -1.93
HTTP42858 AP000942.3-201ENST00000603702 160 ntBASIC2.98□□□□□ -1.93
HTTP42858 RMST_8.1-201ENST00000610287 165 ntBASIC2.98□□□□□ -1.93
HTTP42858 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC2.98□□□□□ -1.93
HTTP42858 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
HTTP42858 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
HTTP42858 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
HTTP42858 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
HTTP42858 AC107081.3-201ENST00000612715 2034 ntBASIC2.97□□□□□ -1.93
HTTP42858 AL049610.1-201ENST00000423374 372 ntBASIC2.97□□□□□ -1.93
HTTP42858 RPL21P99-201ENST00000480369 423 ntBASIC2.97□□□□□ -1.93
HTTP42858 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HTTP42858 AC011270.1-201ENST00000558606 583 ntBASIC2.97□□□□□ -1.93
HTTP42858 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC2.97□□□□□ -1.93
HTTP42858 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HTTP42858 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HTTP42858 CYCSP45-201ENST00000402289 315 ntBASIC2.97□□□□□ -1.93
HTTP42858 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.97□□□□□ -1.93
HTTP42858 RPS21P8-201ENST00000413365 247 ntBASIC2.97□□□□□ -1.93
HTTP42858 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.97□□□□□ -1.93
HTTP42858 RPS12P2-201ENST00000439728 269 ntBASIC2.97□□□□□ -1.93
HTTP42858 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.97□□□□□ -1.93
HTTP42858 ST13P14-201ENST00000474095 734 ntBASIC2.97□□□□□ -1.93
HTTP42858 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.97□□□□□ -1.93
HTTP42858 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.97□□□□□ -1.93
HTTP42858 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.97□□□□□ -1.93
HTTP42858 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.97□□□□□ -1.93
HTTP42858 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.97□□□□□ -1.93
HTTP42858 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC2.97□□□□□ -1.93
HTTP42858 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC2.97□□□□□ -1.93
HTTP42858 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HTTP42858 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HTTP42858 STK31-205ENST00000433467 3085 ntTSL 2 BASIC2.97□□□□□ -1.93
HTTP42858 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC2.97□□□□□ -1.93
HTTP42858 U3.23-201ENST00000391132 200 ntBASIC2.97□□□□□ -1.93
HTTP42858 BTF3P7-201ENST00000407097 488 ntBASIC2.97□□□□□ -1.93
HTTP42858 YPEL5P1-201ENST00000419731 367 ntBASIC2.97□□□□□ -1.93
HTTP42858 KATNBL1P2-201ENST00000433311 835 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms